Search Results - Duncan T. Odom

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  1. 1
    CTCF and Cohesin: Linking Gene Regulatory Elements with Their Targets

    CTCF and Cohesin: Linking Gene Regulatory Elements with Their Targets by Matthias Merkenschlager, Duncan T. Odom

    Published 2013
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  2. 2
    Evolution of transcription factor binding in metazoans — mechanisms and functional implications

    Evolution of transcription factor binding in metazoans — mechanisms and functional implications by Diego Villar, Paul Flicek, Duncan T. Odom

    Published 2014
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  3. 3
    Variations in DNA Charge Transport with Nucleotide Composition and Sequence

    Variations in DNA Charge Transport with Nucleotide Composition and Sequence by Tashica T. Williams, Duncan T. Odom, Jacqueline K. Barton

    Published 2000
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  4. 4
    Crisflash: open-source software to generate CRISPR guide RNAs against genomes annotated with individual variation

    Crisflash: open-source software to generate CRISPR guide RNAs against genomes annotated with individual variation by Adrien L S Jacquin, Duncan T. Odom, Margus Lukk

    Published 2019
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  5. 5
    Nuclear transcription factors in mammalian mitochondria

    Nuclear transcription factors in mammalian mitochondria by Sarah Leigh-Brown, José Antonio Enrı́quez, Duncan T. Odom

    Published 2010
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  6. 6
    Complexity and conservation of regulatory landscapes underlie evolutionary resilience of mammalian gene expression

    Complexity and conservation of regulatory landscapes underlie evolutionary resilience of mammalian gene expression by Camille Berthelot, Diego Villar, Julie E. Horvath, Duncan T. Odom, Paul Flicek

    Published 2017
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  7. 7
    Global Gene Expression Profiling Reveals SPINK1 as a Potential Hepatocellular Carcinoma Marker

    Global Gene Expression Profiling Reveals SPINK1 as a Potential Hepatocellular Carcinoma Marker by Aileen Marshall, Margus Lukk, Claudia Kutter, Susan Davies, Graeme Alexander, Duncan T. Odom

    Published 2013
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  8. 8
    Decoupling of evolutionary changes in transcription factor binding and gene expression in mammals

    Decoupling of evolutionary changes in transcription factor binding and gene expression in mammals by Emily Wong, David Thybert, Bianca M. Schmitt, Klara Stefflova, Duncan T. Odom, Paul Flicek

    Published 2014
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  9. 9
    Protection of CpG islands from DNA methylation is DNA-encoded and evolutionarily conserved

    Protection of CpG islands from DNA methylation is DNA-encoded and evolutionarily conserved by Hannah K. Long, Hamish W. King, Roger Patient, Duncan T. Odom, Robert J. Klose

    Published 2016
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  10. 10
    Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis

    Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis by Christina Ernst, Nils Eling, Celia Pilar Martinez‐Jimenez, John C. Marioni, Duncan T. Odom

    Published 2019
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  11. 11
    ChIP-seq: Using high-throughput sequencing to discover protein–DNA interactions

    ChIP-seq: Using high-throughput sequencing to discover protein–DNA interactions by Dominic Schmidt, Michael D. Wilson, Christiana Spyrou, Gordon D. Brown, James Hadfield, Duncan T. Odom

    Published 2009
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  12. 12
    Comparative Hi-C Reveals that CTCF Underlies Evolution of Chromosomal Domain Architecture

    Comparative Hi-C Reveals that CTCF Underlies Evolution of Chromosomal Domain Architecture by Matteo Vietri Rudan, Christopher Barrington, Stephen Henderson, Christina Ernst, Duncan T. Odom, Amos Tanay, Suzana Hadjur

    Published 2015
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  13. 13
    Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation

    Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation by Joanna Y. Ip, Dominic Schmidt, Qun Pan, Arun Ramani, Andrew Fraser, Duncan T. Odom, Benjamin J. Blencowe

    Published 2010
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  14. 14
    DNA methylation patterns of transcription factor binding regions characterize their functional and evolutionary contexts

    DNA methylation patterns of transcription factor binding regions characterize their functional and evolutionary contexts by Martina Rimoldi, Ning Wang, Jilin Zhang, Diego Villar, Duncan T. Odom, Jussi Taipale, Paul Flicek, Maša Roller

    Published 2024
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  15. 15
    Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes

    Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes by Petra Schwalie, Michelle C. Ward, Carolyn E Cain, André J. Faure, Yoav Gilad, Duncan T. Odom, Paul Flicek

    Published 2013
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  16. 16
    Mutational landscape of a chemically-induced mouse model of liver cancer

    Mutational landscape of a chemically-induced mouse model of liver cancer by Frances Connor, Tim F. Rayner, Sarah J. Aitken, Christine Feig, Margus Lukk, Javier Santoyo‐López, Duncan T. Odom

    Published 2018
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  17. 17
    CTCF maintains regulatory homeostasis of cancer pathways

    CTCF maintains regulatory homeostasis of cancer pathways by Sarah J. Aitken, Ximena Ibarra-Soria, Elissavet Kentepozidou, Paul Flicek, Christine Feig, John C. Marioni, Duncan T. Odom

    Published 2018
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  18. 18
    A CTCF-independent role for cohesin in tissue-specific transcription

    A CTCF-independent role for cohesin in tissue-specific transcription by Dominic Schmidt, Petra Schwalie, Caryn S. Ross-Innes, Antoni Hurtado, Gordon D. Brown, Jason S. Carroll, Paul Flicek, Duncan T. Odom

    Published 2010
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  19. 19
    Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains

    Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains by Elissavet Kentepozidou, Sarah J. Aitken, Christine Feig, Klara Stefflova, Ximena Ibarra-Soria, Duncan T. Odom, Maša Roller, Paul Flicek

    Published 2020
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  20. 20
    Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes

    Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes by Claudia Kutter, Gordon D. Brown, Ângela Gonçalves, Michael D. Wilson, Stephen Watt, Alvis Brāzma, Robert J. White, Duncan T. Odom

    Published 2011
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