檢索結果 - Diekhans, Mark

Regions of extreme synonymous codon selection in mammalian genes 由 Schattner, Peter, Diekhans, Mark

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Whole-Genome Alignment and Comparative Annotation 由 Armstrong, Joel, Fiddes, Ian T., Diekhans, Mark, Paten, Benedict

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LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures 由 Ryan, Michael, Diekhans, Mark, Lien, Stephanie, Liu, Yun, Karchin, Rachel

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Retrocopy contributions to the evolution of the human genome 由 Baertsch, Robert, Diekhans, Mark, Kent, W James, Haussler, David, Brosius, Jürgen

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Cactus: Algorithms for genome multiple sequence alignment 由 Paten, Benedict, Earl, Dent, Nguyen, Ngan, Diekhans, Mark, Zerbino, Daniel, Haussler, David

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halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments 由 Krasheninnikova, Ksenia, Diekhans, Mark, Armstrong, Joel, Dievskii, Aleksei, Paten, Benedict, O’Brien, Stephen

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CHASM and SNVBox: toolkit for detecting biologically important single nucleotide mutations in cancer 由 Wong, Wing Chung, Kim, Dewey, Carter, Hannah, Diekhans, Mark, Ryan, Michael C., Karchin, Rachel

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Comparative Genomics Search for Losses of Long-Established Genes on the Human Lineage 由 Zhu, Jingchun, Sanborn, J. Zachary, Diekhans, Mark, Lowe, Craig B, Pringle, Tom H, Haussler, David

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Cactus Graphs for Genome Comparisons 由 Paten, Benedict, Diekhans, Mark, Earl, Dent, John, John St., Ma, Jian, Suh, Bernard, Haussler, David

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The UCSC Cancer Genomics Browser: update 2015 由 Goldman, Mary, Craft, Brian, Swatloski, Teresa, Cline, Melissa, Morozova, Olena, Diekhans, Mark, Haussler, David, Zhu, Jingchun

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The UCSC Proteome Browser 由 Hsu, Fan, Pringle, Tom H., Kuhn, Robert M., Karolchik, Donna, Diekhans, Mark, Haussler, David, Kent, W. James

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MuPIT Interactive: Webserver for mapping variant positions to annotated, interactive 3D structures 由 Niknafs, Noushin, Kim, Dewey, Kim, Ryang Guk, Diekhans, Mark, Ryan, Michael, Stenson, Peter D., Cooper, David N., Karchin, Rachel

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CRAVAT: cancer-related analysis of variants toolkit 由 Douville, Christopher, Carter, Hannah, Kim, Rick, Niknafs, Noushin, Diekhans, Mark, Stenson, Peter D., Cooper, David N., Ryan, Michael, Karchin, Rachel

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Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes 由 Ezkurdia, Iakes, Juan, David, Rodriguez, Jose Manuel, Frankish, Adam, Diekhans, Mark, Harrow, Jennifer, Vazquez, Jesus, Valencia, Alfonso, Tress, Michael L.

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Evaluating recovery potential of the northern white rhinoceros from cryopreserved somatic cells 由 Tunstall, Tate, Kock, Richard, Vahala, Jiri, Diekhans, Mark, Fiddes, Ian, Armstrong, Joel, Paten, Benedict, Ryder, Oliver A., Steiner, Cynthia C.

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The UCSC Cancer Genomics Browser: update 2013 由 Goldman, Mary, Craft, Brian, Swatloski, Teresa, Ellrott, Kyle, Cline, Melissa, Diekhans, Mark, Ma, Singer, Wilks, Chris, Stuart, Josh, Haussler, David, Zhu, Jingchun

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Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing 由 Furey, Terrence S., Diekhans, Mark, Lu, Yontao, Graves, Tina A., Oddy, Lachlan, Randall-Maher, Jennifer, Hillier, LaDeana W., Wilson, Richard K., Haussler, David

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Identification of high-confidence human poly(A) RNA isoform scaffolds using nanopore sequencing 由 Mulroney, Logan, Wulf, Madalee G., Schildkraut, Ira, Tzertzinis, George, Buswell, John, Jain, Miten, Olsen, Hugh, Diekhans, Mark, Corrêa, Ivan R., Akeson, Mark, Ettwiller, Laurence

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Transcriptional activity and strain-specific history of mouse pseudogenes 由 Sisu, Cristina, Muir, Paul, Frankish, Adam, Fiddes, Ian, Diekhans, Mark, Thybert, David, Odom, Duncan T., Flicek, Paul, Keane, Thomas M., Hubbard, Tim, Harrow, Jennifer, Gerstein, Mark

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Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation 由 Fiddes, Ian T., Armstrong, Joel, Diekhans, Mark, Nachtweide, Stefanie, Kronenberg, Zev N., Underwood, Jason G., Gordon, David, Earl, Dent, Keane, Thomas, Eichler, Evan E., Haussler, David, Stanke, Mario, Paten, Benedict

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