检索结果 - Demir, Emek

Crosstalk between signaling pathways provided by single and multiple protein phosphorylation sites 由 Nishi, Hafumi, Demir, Emek, Panchenko, Anna R.

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Algorithms for effective querying of compound graph-based pathway databases 由 Dogrusoz, Ugur, Cetintas, Ahmet, Demir, Emek, Babur, Ozgun

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ChiBE: interactive visualization and manipulation of BioPAX pathway models 由 Babur, Ozgun, Dogrusoz, Ugur, Demir, Emek, Sander, Chris

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The BioPAX Validator 由 Rodchenkov, Igor, Demir, Emek, Sander, Chris, Bader, Gary D.

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Automated Network Analysis Identifies Core Pathways in Glioblastoma 由 Cerami, Ethan, Demir, Emek, Schultz, Nikolaus, Taylor, Barry S., Sander, Chris

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Discovering modulators of gene expression 由 Babur, Özgün, Demir, Emek, Gönen, Mithat, Sander, Chris, Dogrusoz, Ugur

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Systematic interrogation of mutation groupings reveals divergent downstream expression programs within key cancer genes 由 Grzadkowski, Michal R., Holly, Hannah D., Somers, Julia, Demir, Emek

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PaxtoolsR: pathway analysis in R using Pathway Commons 由 Luna, Augustin, Babur, Özgün, Aksoy, Bülent Arman, Demir, Emek, Sander, Chris

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Pattern search in BioPAX models 由 Babur, Özgün, Aksoy, Bülent Arman, Rodchenkov, Igor, Sümer, Selçuk Onur, Sander, Chris, Demir, Emek

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BioPAX support in CellDesigner 由 Mi, Huaiyu, Muruganujan, Anushya, Demir, Emek, Matsuoka, Yukiko, Funahashi, Akira, Kitano, Hiroaki, Thomas, Paul D.

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Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles 由 Aksoy, Bülent Arman, Demir, Emek, Babur, Özgün, Wang, Weiqing, Jing, Xiaohong, Schultz, Nikolaus, Sander, Chris

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Integrating biological pathways and genomic profiles with ChiBE 2 由 Babur, Özgün, Dogrusoz, Ugur, Çakır, Merve, Aksoy, Bülent Arman, Schultz, Nikolaus, Sander, Chris, Demir, Emek

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Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations 由 Babur, Özgün, Gönen, Mithat, Aksoy, Bülent Arman, Schultz, Nikolaus, Ciriello, Giovanni, Sander, Chris, Demir, Emek

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Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE) 由 Le Novère, Nicolas, Hucka, Michael, Anwar, Nadia, Bader, Gary D, Demir, Emek, Moodie, Stuart, Sorokin, Anatoly

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SBGNViz: A Tool for Visualization and Complexity Management of SBGN Process Description Maps 由 Sari, Mecit, Bahceci, Istemi, Dogrusoz, Ugur, Sumer, Selcuk Onur, Aksoy, Bülent Arman, Babur, Özgün, Demir, Emek

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Analyzing causal relationships in proteomic profiles using CausalPath 由 Luna, Augustin, Siper, Metin Can, Korkut, Anil, Durupinar, Funda, Dogrusoz, Ugur, Aslan, Joseph E., Sander, Chris, Demir, Emek, Babur, Ozgun

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Pathway Commons, a web resource for biological pathway data 由 Cerami, Ethan G., Gross, Benjamin E., Demir, Emek, Rodchenkov, Igor, Babur, Özgün, Anwar, Nadia, Schultz, Nikolaus, Bader, Gary D., Sander, Chris

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Using Biological Pathway Data with Paxtools 由 Demir, Emek, Babur, Özgün, Rodchenkov, Igor, Aksoy, Bülent Arman, Fukuda, Ken I., Gross, Benjamin, Sümer, Onur Selçuk, Bader, Gary D., Sander, Chris

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Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis 由 Vedanayagam, Jeffrey, Chatila, Walid K., Aksoy, Bülent Arman, Majumdar, Sonali, Skanderup, Anders Jacobsen, Demir, Emek, Schultz, Nikolaus, Sander, Chris, Lai, Eric C.

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Large-scale automated machine reading discovers new cancer-driving mechanisms 由 Valenzuela-Escárcega, Marco A, Babur, Özgün, Hahn-Powell, Gus, Bell, Dane, Hicks, Thomas, Noriega-Atala, Enrique, Wang, Xia, Surdeanu, Mihai, Demir, Emek, Morrison, Clayton T

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