Ngā hua rapu - Degasperi, Andrea

Performance of objective functions and optimisation procedures for parameter estimation in system biology models mā Degasperi, Andrea, Fey, Dirk, Kholodenko, Boris N.

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DYVIPAC: an integrated analysis and visualisation framework to probe multi-dimensional biological networks mā Nguyen, Lan K., Degasperi, Andrea, Cotter, Philip, Kholodenko, Boris N.

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Evaluating Strategies to Normalise Biological Replicates of Western Blot Data mā Degasperi, Andrea, Birtwistle, Marc R., Volinsky, Natalia, Rauch, Jens, Kolch, Walter, Kholodenko, Boris N.

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Spectrum of mutational signatures in T-cell lymphoma reveals a key role for UV radiation in cutaneous T-cell lymphoma mā Jones, Christine L., Degasperi, Andrea, Grandi, Vieri, Amarante, Tauanne D., Mitchell, Tracey J., Nik-Zainal, Serena, Whittaker, Sean J.

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Dramatic response of metastatic cutaneous angiosarcoma to an immune checkpoint inhibitor in a patient with xeroderma pigmentosum: whole-genome sequencing aids treatment decision in... mā Momen, Sophie, Fassihi, Hiva, Davies, Helen R., Nikolaou, Christos, Degasperi, Andrea, Stefanato, Catherine M., Dias, Joao M. L., Dasgupta, Dhruba, Craythorne, Emma, Sarkany, Robert, Papa, Sophie, Nik-Zainal, Serena

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Mitochondrial reactive oxygen species enhance AMP-activated protein kinase activation in the endothelium of patients with coronary artery disease and diabetes mā Mackenzie, Ruth M., Salt, Ian P., Miller, William H., Logan, Angela, Ibrahim, Hagar A., Degasperi, Andrea, Dymott, Jane A., Hamilton, Carlene A., Murphy, Michael P., Delles, Christian, Dominiczak, Anna F.

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A Compendium of Mutational Signatures of Environmental Agents mā Kucab, Jill E., Zou, Xueqing, Morganella, Sandro, Joel, Madeleine, Nanda, A. Scott, Nagy, Eszter, Gomez, Celine, Degasperi, Andrea, Harris, Rebecca, Jackson, Stephen P., Arlt, Volker M., Phillips, David H., Nik-Zainal, Serena

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A practical guide for mutational signature analysis in hematological malignancies mā Maura, Francesco, Degasperi, Andrea, Nadeu, Ferran, Leongamornlert, Daniel, Davies, Helen, Moore, Luiza, Royo, Romina, Ziccheddu, Bachisio, Puente, Xose S., Avet-Loiseau, Herve, Campbell, Peter J., Nik-Zainal, Serena, Campo, Elias, Munshi, Nikhil, Bolli, Niccolò

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Author Correction: A practical guide for mutational signature analysis in hematological malignancies mā Maura, Francesco, Degasperi, Andrea, Nadeu, Ferran, Leongamornlert, Daniel, Davies, Helen, Moore, Luiza, Royo, Romina, Ziccheddu, Bachisio, Puente, Xose S., Avet-Loiseau, Herve, Campbell, Peter J., Nik-Zainal, Serena, Campo, Elias, Munshi, Nikhil, Bolli, Niccolò

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A practical framework and online tool for mutational signature analyses show inter-tissue variation and driver dependencies mā Degasperi, Andrea, Amarante, Tauanne Dias, Czarnecki, Jan, Shooter, Scott, Zou, Xueqing, Glodzik, Dominik, Morganella, Sandro, Nanda, Arjun S., Badja, Cherif, Koh, Gene, Momen, Sophie E., Georgakopoulos-Soares, Ilias, Dias, João M. L., Young, Jamie, Memari, Yasin, Davies, Helen, Nik-Zainal, Serena

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Bistability in the Rac1, PAK, and RhoA Signaling Network Drives Actin Cytoskeleton Dynamics and Cell Motility Switches mā Byrne, Kate M., Monsefi, Naser, Dawson, John C., Degasperi, Andrea, Bukowski-Wills, Jimi-Carlo, Volinsky, Natalia, Dobrzyński, Maciej, Birtwistle, Marc R., Tsyganov, Mikhail A., Kiyatkin, Anatoly, Kida, Katarzyna, Finch, Andrew J., Carragher, Neil O., Kolch, Walter, Nguyen, Lan K., von Kriegsheim, Alex, Kholodenko, Boris N.

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Whole-genome-sequencing of triple negative breast cancers in a population-based clinical study mā Staaf, Johan, Glodzik, Dominik, Bosch, Ana, Vallon-Christersson, Johan, Reuterswärd, Christel, Häkkinen, Jari, Degasperi, Andrea, Amarante, Tauanne Dias, Saal, Lao H., Hegardt, Cecilia, Stobart, Hilary, Ehinger, Anna, Larsson, Christer, Rydén, Lisa, Loman, Niklas, Malmberg, Martin, Kvist, Anders, Ehrencrona, Hans, Davies, Helen R., Borg, Åke, Nik-Zainal, Serena

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Homologous recombination DNA repair deficiency and PARP inhibition activity in primary triple negative breast cancer mā Chopra, Neha, Tovey, Holly, Pearson, Alex, Cutts, Ros, Toms, Christy, Proszek, Paula, Hubank, Michael, Dowsett, Mitch, Dodson, Andrew, Daley, Frances, Kriplani, Divya, Gevensleben, Heidi, Davies, Helen Ruth, Degasperi, Andrea, Roylance, Rebecca, Chan, Stephen, Tutt, Andrew, Skene, Anthony, Evans, Abigail, Bliss, Judith M., Nik-Zainal, Serena, Turner, Nicholas C.

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Report from the 4th European Bone Sarcoma Networking meeting: focus on osteosarcoma mā Strauss, Sandra J., Anninga, Jakob, Baglio, Rubina, Baumhoer, Daniel, Behjati, Sam, Bielack, Stefan, Boye, Kjetil, Broto, Javier M., Cleton-Jansen, Anne-Marie, Degasperi, Andrea, Evans, Abigail, Fagioli, Franca, Fiocco, Marta, Gaspar, Nathalie, Heymann, Dominique, Hindi, Nadia, Lancia, Carlo, Myklebost, Ola, Nathrath, Michaela, Redini, Francoise, Scotlandi, Katia, Tirtei, Elisa, Vanden Eynden, Michel, Whelan, Jeremy

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A systematic CRISPR screen defines mutational mechanisms underpinning signatures caused by replication errors and endogenous DNA damage mā Zou, Xueqing, Koh, Gene Ching Chiek, Nanda, Arjun Scott, Degasperi, Andrea, Urgo, Katie, Roumeliotis, Theodoros I., Agu, Chukwuma A, Badja, Cherif, Momen, Sophie, Young, Jamie, Amarante, Tauanne Dias, Side, Lucy, Brice, Glen, Perez-Alonso, Vanesa, Rueda, Daniel, Gomez, Celine, Bushell, Wendy, Harris, Rebecca, Choudhary, Jyoti S., Jiricny, Josef, Skarne, William C, Nik-Zainal, Serena

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Substitution mutational signatures in whole-genome-sequenced cancers in the UK population mā Degasperi, Andrea, Zou, Xueqing, Amarante, Tauanne Dias, Martinez-Martinez, Andrea, Koh, Gene Ching Chiek, Dias, João M. L., Heskin, Laura, Chmelova, Lucia, Rinaldi, Giuseppe, Wang, Valerie Ya Wen, Nanda, Arjun S., Bernstein, Aaron, Momen, Sophie E., Young, Jamie, Perez-Gil, Daniel, Memari, Yasin, Badja, Cherif, Shooter, Scott, Czarnecki, Jan, Brown, Matthew A., Davies, Helen R., Nik-Zainal, Serena

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Preclinical in vivo validation of the RAD51 test for identification of homologous recombination-deficient tumors and patient stratification mā Pellegrino, Benedetta, Herencia-Ropero, Andrea, Llop-Guevara, Alba, Pedretti, Flaminia, Moles-Fernández, Alejandro, Viaplana, Cristina, Villacampa, Guillermo, Guzmán, Marta, Rodríguez, Olga, Grueso, Judit, Jiménez, Jose, Arenas, Enrique J., Degasperi, Andrea, Dias, João M. L., Forment, Josep V., O’Connor, Mark J., Déas, Olivier, Cairo, Stefano, Zhou, Yinghui, Musolino, Antonino, Caldas, Carlos, Nik-Zainal, Serena, Clarke, Robert B., Nuciforo, Paolo, Díez, Orland, Serres-Créixams, Xavier, Peg, Vicente, Espinosa-Bravo, Martín, Macarulla, Teresa, Oaknin, Ana, Mateo, Joaquin, Arribas, Joaquín, Dienstmann, Rodrigo, Bellet, Meritxell, Oliveira, Mafalda, Saura, Cristina, Gutiérrez-Enríquez, Sara, Balmaña, Judith, Serra, Violeta

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