Suchergebnisse - David Danko

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  1. 1
    Entropy-Scaling Search of Massive Biological Data

    Entropy-Scaling Search of Massive Biological Data von Yun William Yu, Noah M. Daniels, David Danko, Bonnie Berger

    Veröffentlicht 2015
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  2. 2
    Forecasting Dengue Fever in Brazil Using Multimodal Data, Including Climate Data

    Forecasting Dengue Fever in Brazil Using Multimodal Data, Including Climate Data von David Danko, Charles J Vörösmarty, Anthony D. Cak, Corsi Fm, Suraj J. Patel, John C Papciak, Heather Wells, Anthony Albanese, Christopher E. Mason, Rafael Maciel‐de‐Freitas, Dorottya Nagy-Szakál, Niamh B. O’Hara

    Veröffentlicht 2024
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  3. 3
    Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

    Comprehensive benchmarking and ensemble approaches for metagenomic classifiers von Alexa B. R. McIntyre, Rachid Ounit, Ebrahim Afshinnekoo, Robert J. Prill, Elizabeth Hénaff, Noah Alexander, Samuel S. Minot, David Danko, Jonathan Foox, Sofia Ahsanuddin, Scott Tighe, Nur A. Hasan, Poorani Subramanian, Kelly Moffat, Shawn Levy, Stefano Lonardi, Nick Greenfield, Rita R. Colwell, Gail Rosen, Christopher E. Mason

    Veröffentlicht 2017
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  4. 4
    Epsilon toxin–producing Clostridium perfringens colonize the multiple sclerosis gut microbiome overcoming CNS immune privilege

    Epsilon toxin–producing Clostridium perfringens colonize the multiple sclerosis gut microbiome overcoming CNS immune privilege von Yinghua Ma, David R. Sannino, Jennifer R. Linden, Sylvia Haigh, Baohua Zhao, John B. Grigg, Paul Zumbo, Friederike Dündar, Daniel Butler, Caterina P. Profaci, Kiel M. Telesford, Paige Winokur, Kareem Rashid Rumah, Susan A. Gauthier, Vincent A. Fischetti, Bruce A. McClane, Francisco A. Uzal, Lily Zexter, Michael Mazzucco, Richard A. Rudick, David Danko, Evan A. Balmuth, Nancy Nealon, Jai Perumal, Ulrike W. Kaunzner, Ilana Brito, Zhengming Chen, Jenny Xiang, Doron Betel, Richard Daneman, Gregory F. Sonnenberg, Christopher E. Mason, Timothy Vartanian

    Veröffentlicht 2023
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  5. 5
    System-wide transcriptome damage and tissue identity loss in COVID-19 patients

    System-wide transcriptome damage and tissue identity loss in COVID-19 patients von Jiwoon Park, Jonathan Foox, Tyler Hether, David Danko, Sarah Warren, Youngmi Kim, Jason Reeves, Daniel Butler, Christopher Mozsary, Joel Rosiene, Alon Shaiber, Evan E. Afshin, Matthew MacKay, André F. Rendeiro, Yaron Bram, Vasuretha Chandar, Heather Geiger, Arryn Craney, Priya Velu, Ari Melnick, Iman Hajirasouliha, Afshin Beheshti, Deanne Taylor, Amanda Saravia-Butler, Urminder Singh, Eve Syrkin Wurtele, Jonathan C. Schisler, Samantha Fennessey, André Corvelo, Michael C. Zody, Søren Germer, Steven Salvatore, Shawn Levy, Shixiu Wu, Nicholas P. Tatonetti, Sagi Shapira, Mirella Salvatore, Lars F. Westblade, Melissa M. Cushing, Hanna Rennert, Alison J. Kriegel, Olivier Elemento, Marcin Imieliński, Charles M. Rice, Alain Borczuk, Cem Meydan, Robert E. Schwartz, Christopher E. Mason

    Veröffentlicht 2022
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  6. 6
    Host, Viral, and Environmental Transcriptome Profiles of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)

    Host, Viral, and Environmental Transcriptome Profiles of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) von Daniel Butler, Christopher Mozsary, Cem Meydan, David Danko, Jonathan Foox, Joel Rosiene, Alon Shaiber, Ebrahim Afshinnekoo, Matthew MacKay, Fritz J. Sedlazeck, Nikolay A. Ivanov, Maria A. Sierra, Diana Pohle, Michael Zietz, Undina Gisladottir, Vijendra Ramlall, Craig Westover, Krista Ryon, Benjamin Young, Chandrima Bhattacharya, Phyllis Ruggiero, Bradley W. Langhorst, Nathan A. Tanner, Justyna Gawrys, Dmitry Meleshko, Dong Xu, Peter A.D. Steel, Amos Shemesh, Jenny Xiang, Jean Thierry‐Mieg, Danielle Thierry‐Mieg, Robert E. Schwartz, Angelika Iftner, Daniela Bezdan, John Sipley, Lin William Cong, Arryn Craney, Priya Velu, Ari Melnick, Iman Hajirasouliha, Stacy M. Horner, Thomas Iftner, Mirella Salvatore, Massimo Loda, Lars F. Westblade, Shawn Levy, Melissa M. Cushing, Shixiu Wu, Nicholas P. Tatonetti, Marcin Imieliński, Hanna Rennert, Christopher E. Mason

    Veröffentlicht 2020
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  7. 7
    Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

    Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions von Daniel Butler, Christopher Mozsary, Cem Meydan, David Danko, Jonathan Foox, Joel Rosiene, Alon Shaiber, Ebrahim Afshinnekoo, Matthew MacKay, Fritz J. Sedlazeck, Nikolay A. Ivanov, Maria A. Sierra, Diana Pohle, Michael Zietz, Undina Gisladottir, Vijendra Ramlall, Craig Westover, Krista Ryon, Benjamin Young, Chandrima Bhattacharya, Phyllis Ruggiero, Bradley W. Langhorst, Nathan A. Tanner, Justyna Gawrys, Dmitry Meleshko, Dong Xu, Peter A.D. Steel, Amos Shemesh, Jenny Xiang, Jean Thierry‐Mieg, Danielle Thierry‐Mieg, Robert E. Schwartz, Angelika Iftner, Daniela Bezdan, John Sipley, Lin William Cong, Arryn Craney, Priya Velu, Ari Melnick, Iman Hajirasouliha, Stacy M. Horner, Thomas Iftner, Mirella Salvatore, Massimo Loda, Lars F. Westblade, Melissa M. Cushing, Shawn Levy, Shixiu Wu, Nicholas P. Tatonetti, Marcin Imieliński, Hanna Rennert, Christopher E. Mason

    Veröffentlicht 2020
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  8. 8
    Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions

    Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions von Daniel Butler, Christopher Mozsary, Cem Meydan, Jonathan Foox, Joel Rosiene, Alon Shaiber, David Danko, Ebrahim Afshinnekoo, Matthew MacKay, Fritz J. Sedlazeck, Nikolay A. Ivanov, Maria A. Sierra, Diana Pohle, Michael Zietz, Undina Gisladottir, Vijendra Ramlall, Evan Sholle, Edward J. Schenck, Craig Westover, Ciaran Hassan, Krista Ryon, Benjamin Young, Chandrima Bhattacharya, Dianna L. Ng, Andrea Granados, Yale A. Santos, Venice Servellita, Scot Federman, Phyllis Ruggiero, Arkarachai Fungtammasan, Chen-Shan Chin, Nathaniel M. Pearson, Bradley W. Langhorst, Nathan A. Tanner, Young Mi Kim, Jason Reeves, Tyler Hether, Sarah Warren, Michael Bailey, Justyna Gawrys, Dmitry Meleshko, Dong Xu, Mara Couto-Rodriguez, Dorottya Nagy-Szakál, Joseph Barrows, Heather Wells, Niamh B. O’Hara, Jeffrey Rosenfeld, Ying Chen, Peter A.D. Steel, Amos Shemesh, Jenny Xiang, Jean Thierry‐Mieg, Danielle Thierry‐Mieg, Angelika Iftner, Daniela Bezdan, Elizabeth Sánchez, Thomas R. Campion, John Sipley, Lin William Cong, Arryn Craney, Priya Velu, Ari Melnick, Sagi Shapira, Iman Hajirasouliha, Alain Borczuk, Thomas Iftner, Mirella Salvatore, Massimo Loda, Lars F. Westblade, Melissa M. Cushing, Shixiu Wu, Shawn Levy, Charles Y. Chiu, Robert E. Schwartz, Nicholas P. Tatonetti, Hanna Rennert, Marcin Imieliński, Christopher E. Mason

    Veröffentlicht 2021
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  9. 9
    Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment

    Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment von Kern Rei Chng, Chenhao Li, Denis Bertrand, Amanda Hui Qi Ng, Junmei Samantha Kwah, Hwee Meng Low, Chengxuan Tong, Maanasa Natrajan, Michael Hongjie Zhang, Licheng Xu, Karrie Kwan Ki Ko, Eliza Xin Pei Ho, Tamar V. Av‐Shalom, Jeanette Teo, Chiea Chuen Khor, David Danko, Daniela Bezdan, Ebrahim Afshinnekoo, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler, Kern Rei Chng, Francesca De Filippis, Jochen Hecht, André Kahles, Mikhail Karasikov, Nikos C. Kyrpides, Marcus H. Y. Leung, Dmitry Meleshko, Harun Mustafa, Beth Mutai, Russell Y. Neches, Amanda Hui Qi Ng, Marina Nieto‐Caballero, Olga Nikolayeva, Tatyana Nikolayeva, Eileen Png, Jorge L. Sánchez, Heba Shaaban, Maria A. Sierra, Xinzhao Tong, Ben Young, Josue Alicea, Malay Bhattacharyya, Ran Blekhman, Eduardo Castro‐Nallar, A Cañas, Aspassia D. Chatziefthimiou, Robert W. Crawford, Youping Deng, Christelle Desnues, Emmanuel Dias‐Neto, Daisy Donnellan, Marius Dybwad, Eran Elhaik, Danilo Ercolini, Alina Frolova, Alexandra Gráf, David C. Green, Iman Hajirasouliha, Mark Hernandez, Gregorio Iraola, Soojin Jang, Angela Jones, Frank J. Kelly, Kaymisha Knights, Paweł P. Łabaj, Patrick K. H. Lee, Levy Shawn, Per O. Ljungdahl, Abigail Lyons, Gabriella Mason-Buck, Ken McGrath, Emmanuel F. Mongodin, Milton Ozório Moraes, Niranjan Nagarajan, Houtan Noushmehr, Manuela Oliveira, Stephan Ossowski, Olayinka Osuolale, Orhan Özcan, David Páez-Espino, Nicolás Rascovan, Hugues Richard, Gunnar Rätsch, Lynn M. Schriml, Torsten Semmler, Uğur Sezerman, Leming Shi, Le Huu Song, Haruo Suzuki, Denise Syndercombe Court, Dominique Thomas, Scott Tighe, Klas I. Udekwu, Juan A. Ugalde, Brandon Valentine, Dimitar Vassilev, Elena Vayndorf, Thirumalaisamy P. Velavan

    Veröffentlicht 2020
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  10. 10
    A global metagenomic map of urban microbiomes and antimicrobial resistance

    A global metagenomic map of urban microbiomes and antimicrobial resistance von David Danko, Daniela Bezdan, Evan E. Afshin, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler, Kern Rei Chng, Daisy Donnellan, Jochen Hecht, Katelyn Jackson, Katerina Kuchin, Mikhail Karasikov, Abigail Lyons, Lauren Mak, Dmitry Meleshko, Harun Mustafa, Beth Mutai, Russell Y. Neches, Amanda Hui Qi Ng, Olga Nikolayeva, Tatyana Nikolayeva, Eileen Png, Krista Ryon, Jorge L. Sánchez, Heba Shaaban, Maria A. Sierra, Dominique Thomas, Ben Young, Omar O. Abudayyeh, Josue Alicea, Malay Bhattacharyya, Ran Blekhman, Eduardo Castro‐Nallar, A Cañas, Aspassia D. Chatziefthimiou, Robert W. Crawford, Francesca De Filippis, Youping Deng, Christelle Desnues, Emmanuel Dias‐Neto, Marius Dybwad, Eran Elhaik, Danilo Ercolini, Alina Frolova, Dennis Gankin, Jonathan S. Gootenberg, Alexandra Gráf, David C. Green, Iman Hajirasouliha, Jaden J. A. Hastings, Mark Hernandez, Gregorio Iraola, Soojin Jang, André Kahles, Frank J. Kelly, Kaymisha Knights, Nikos C. Kyrpides, Paweł P. Łabaj, Patrick K. H. Lee, Marcus H. Y. Leung, Per O. Ljungdahl, Gabriella Mason-Buck, Ken McGrath, Cem Meydan, Emmanuel F. Mongodin, Milton Ozório Moraes, Niranjan Nagarajan, Marina Nieto‐Caballero, Houtan Noushmehr, Manuela Oliveira, Stephan Ossowski, Olayinka Osuolale, Orhan Özcan, David Páez-Espino, Nicolás Rascovan, Hugues Richard, Gunnar Rätsch, Lynn M. Schriml, Torsten Semmler, Uğur Sezerman, Leming Shi, Tieliu Shi, Rania Siam, Le Huu Song, Haruo Suzuki, Denise Syndercombe Court, Scott Tighe, Xinzhao Tong, Klas I. Udekwu, Juan A. Ugalde, Brandon Valentine, Dimitar Vassilev, Elena Vayndorf, Thirumalaisamy P. Velavan, Jun Wu, María Mercedes Zambrano, Jifeng Zhu, Sibo Zhu, Christopher E. Mason, Nurul Akmaryanti Abdullah

    Veröffentlicht 2021
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