Ngā hua rapu kaituhi :: APM

1

Within-Host Bacterial Diversity Hinders Accurate Reconstruction of Transmission Networks from Genomic Distance Data mā Colin J. Worby, Marc Lipsitch, William P. Hanage

I whakaputaina 2014

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2

Shared Genomic Variants: Identification of Transmission Routes Using Pathogen Deep-Sequence Data mā Colin J. Worby, Marc Lipsitch, William P. Hanage

I whakaputaina 2017

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3

The Distribution of Pairwise Genetic Distances: A Tool for Investigating Disease Transmission mā Colin J. Worby, Hsiao‐Han Chang, William P. Hanage, Marc Lipsitch

I whakaputaina 2014

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4

Bayesian reconstruction of transmission within outbreaks using genomic variants mā Nicola De Maio, Colin J. Worby, Daniel J. Wilson, Nicole Stoesser

I whakaputaina 2018

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5

On the relative role of different age groups in influenza epidemics mā Colin J. Worby, Sandra S. Chaves, Jacco Wallinga, Marc Lipsitch, Lyn Finelli, Edward Goldstein

I whakaputaina 2015

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6

Establishing the role of the gut microbiota in susceptibility to recurrent urinary tract infections mā Colin J. Worby, Benjamin S. Olson, Karen Dodson, Ashlee M. Earl, Scott J. Hultgren

I whakaputaina 2022

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7

On the Relative Role of Different Age Groups During Epidemics Associated With Respiratory Syncytial Virus mā Edward Goldstein, Hieu Nguyen, Patrick Liu, Cécile Viboud, Claudia Steiner, Colin J. Worby, Marc Lipsitch

I whakaputaina 2017

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8

Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General Wards mā Colin J. Worby, Dakshika Jeyaratnam, Julie V. Robotham, Theodore Kypraios, Philip D. O’Neill, Daniela De Angelis, G.L. French, Ben S. Cooper

I whakaputaina 2013

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9

Contaminated drinking water facilitates Escherichia coli strain-sharing within households in urban informal settlements mā Daehyun D. Kim, Jenna M. Swarthout, Colin J. Worby, Benard Chieng, John Mboya, Ashlee M. Earl, Sammy M. Njenga, Amy J. Pickering

I whakaputaina 2025

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10

StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities mā Lucas R. van Dijk, Bruce J. Walker, Timothy J. Straub, Colin J. Worby, Alexandra Grote, Henry L. Schreiber, Christine Anyansi, Amy J. Pickering, Scott J. Hultgren, Abigail L. Manson, Thomas Abeel, Ashlee M. Earl

I whakaputaina 2022

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11

THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites mā Hsiao‐Han Chang, Colin J. Worby, Adoke Yeka, Joaniter I. Nankabirwa, Moses R. Kamya, Sarah G. Staedke, Grant Dorsey, Maxwell Murphy, Daniel E. Neafsey, Anna E. Jeffreys, Christina Hubbart, Kirk A. Rockett, Roberto Amato, Dominic Kwiatkowski, Caroline O. Buckee, Bryan Greenhouse

I whakaputaina 2017

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12

Drinking water chlorination has minor effects on the intestinal flora and resistomes of Bangladeshi children mā Maya Nadimpalli, Val F. Lanza, María Camila Montealegre, Sonia Sultana, Erica R. Fuhrmeister, Colin J. Worby, Lisa Teichmann, Lea Caduff, Jenna M. Swarthout, Yoshika S. Crider, Ashlee M. Earl, Joe Brown, Stephen P. Luby, Mohammad Aminul Islam, Timothy R. Julian, Amy J. Pickering

I whakaputaina 2022

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13

Evaluating the relationship between community water and sanitation access and the global burden of antibiotic resistance: an ecological study mā Erica R. Fuhrmeister, Abigail P. Harvey, Maya Nadimpalli, Karin Gallandat, Argaw Ambelu, Benjamin F. Arnold, Joe Brown, Oliver Cumming, Ashlee M. Earl, Gagandeep Kang, Samuel Kariuki, Karen Lévy, Chris Pinto J., Jenna M. Swarthout, Gabriel Trueba, Pablo Tsukayama, Colin J. Worby, Amy J. Pickering

I whakaputaina 2023

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14

Gut microbiome perturbation, antibiotic resistance, and Escherichia coli strain dynamics associated with international travel: a metagenomic analysis mā Colin J. Worby, Sushmita Sridhar, Sarah E. Turbett, Margaret V Becker, Lucyna Kogut, Vanessa Sanchez, Ryan A. Bronson, Sowmya R. Rao, Elizabeth Oliver, Allison Taylor Walker, Maroya Spalding Walters, Paul Kelly, Daniel T. Leung, Mark Knouse, Stefan Hagmann, Jason B. Harris, Edward T. Ryan, Ashlee M. Earl, Regina C. LaRocque

I whakaputaina 2023

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15

Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women mā Colin J. Worby, Henry L. Schreiber, Timothy J. Straub, Lucas R. van Dijk, Ryan A. Bronson, Benjamin S. Olson, Jerome S. Pinkner, Chloe L. P. Obernuefemann, Vanessa L. Muñoz, Alexandra E. Paharik, Philippe Azimzadeh, Bruce J. Walker, Christopher A. Desjardins, Wen‐Chi Chou, Karla Bergeron, Sinéad B. Chapman, Aleksandra Klim, Abigail L. Manson, Thomas J. Hannan, Thomas M. Hooton, Andrew L. Kau, H. Henry Lai, Karen Dodson, Scott J. Hultgren, Ashlee M. Earl

I whakaputaina 2022

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16

Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance mā Rauf Salamzade, Abigail L. Manson, Bruce J. Walker, Thea Brennan-Krohn, Colin J. Worby, Peijun Ma, Lorrie L. He, Terrance Shea, James Qu, Sinéad B. Chapman, Whitney Howe, Sarah Young, Jenna I. Wurster, Mary L. Delaney, Sanjat Kanjilal, Andrew B. Onderdonk, Cassiana E. Bittencourt, Gabrielle Gussin, Diane Kim, Ellena M. Peterson, Mary Jane Ferraro, David C. Hooper, Erica S. Shenoy, Christina A. Cuomo, Lisa A. Cosimi, Susan S. Huang, James E. Kirby, Virginia Pierce, Roby P. Bhattacharyya, Ashlee M. Earl

I whakaputaina 2022

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