Søgeresultater - Colin J. Worby

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  1. 1
    Within-Host Bacterial Diversity Hinders Accurate Reconstruction of Transmission Networks from Genomic Distance Data

    Within-Host Bacterial Diversity Hinders Accurate Reconstruction of Transmission Networks from Genomic Distance Data af Colin J. Worby, Marc Lipsitch, William P. Hanage

    Udgivet 2014
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  2. 2
    Shared Genomic Variants: Identification of Transmission Routes Using Pathogen Deep-Sequence Data

    Shared Genomic Variants: Identification of Transmission Routes Using Pathogen Deep-Sequence Data af Colin J. Worby, Marc Lipsitch, William P. Hanage

    Udgivet 2017
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  3. 3
    The Distribution of Pairwise Genetic Distances: A Tool for Investigating Disease Transmission

    The Distribution of Pairwise Genetic Distances: A Tool for Investigating Disease Transmission af Colin J. Worby, Hsiao‐Han Chang, William P. Hanage, Marc Lipsitch

    Udgivet 2014
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  4. 4
    Bayesian reconstruction of transmission within outbreaks using genomic variants

    Bayesian reconstruction of transmission within outbreaks using genomic variants af Nicola De Maio, Colin J. Worby, Daniel J. Wilson, Nicole Stoesser

    Udgivet 2018
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  5. 5
    On the relative role of different age groups in influenza epidemics

    On the relative role of different age groups in influenza epidemics af Colin J. Worby, Sandra S. Chaves, Jacco Wallinga, Marc Lipsitch, Lyn Finelli, Edward Goldstein

    Udgivet 2015
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  6. 6
    Establishing the role of the gut microbiota in susceptibility to recurrent urinary tract infections

    Establishing the role of the gut microbiota in susceptibility to recurrent urinary tract infections af Colin J. Worby, Benjamin S. Olson, Karen Dodson, Ashlee M. Earl, Scott J. Hultgren

    Udgivet 2022
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  7. 7
    On the Relative Role of Different Age Groups During Epidemics Associated With Respiratory Syncytial Virus

    On the Relative Role of Different Age Groups During Epidemics Associated With Respiratory Syncytial Virus af Edward Goldstein, Hieu Nguyen, Patrick Liu, Cécile Viboud, Claudia Steiner, Colin J. Worby, Marc Lipsitch

    Udgivet 2017
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  8. 8
    Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General Wards

    Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General Wards af Colin J. Worby, Dakshika Jeyaratnam, Julie V. Robotham, Theodore Kypraios, Philip D. O’Neill, Daniela De Angelis, G.L. French, Ben S. Cooper

    Udgivet 2013
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  9. 9
    Contaminated drinking water facilitates Escherichia coli strain-sharing within households in urban informal settlements

    Contaminated drinking water facilitates Escherichia coli strain-sharing within households in urban informal settlements af Daehyun D. Kim, Jenna M. Swarthout, Colin J. Worby, Benard Chieng, John Mboya, Ashlee M. Earl, Sammy M. Njenga, Amy J. Pickering

    Udgivet 2025
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  10. 10
    StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities

    StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities af Lucas R. van Dijk, Bruce J. Walker, Timothy J. Straub, Colin J. Worby, Alexandra Grote, Henry L. Schreiber, Christine Anyansi, Amy J. Pickering, Scott J. Hultgren, Abigail L. Manson, Thomas Abeel, Ashlee M. Earl

    Udgivet 2022
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  11. 11
    THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites

    THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites af Hsiao‐Han Chang, Colin J. Worby, Adoke Yeka, Joaniter I. Nankabirwa, Moses R. Kamya, Sarah G. Staedke, Grant Dorsey, Maxwell Murphy, Daniel E. Neafsey, Anna E. Jeffreys, Christina Hubbart, Kirk A. Rockett, Roberto Amato, Dominic Kwiatkowski, Caroline O. Buckee, Bryan Greenhouse

    Udgivet 2017
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  12. 12
    Drinking water chlorination has minor effects on the intestinal flora and resistomes of Bangladeshi children

    Drinking water chlorination has minor effects on the intestinal flora and resistomes of Bangladeshi children af Maya Nadimpalli, Val F. Lanza, María Camila Montealegre, Sonia Sultana, Erica R. Fuhrmeister, Colin J. Worby, Lisa Teichmann, Lea Caduff, Jenna M. Swarthout, Yoshika S. Crider, Ashlee M. Earl, Joe Brown, Stephen P. Luby, Mohammad Aminul Islam, Timothy R. Julian, Amy J. Pickering

    Udgivet 2022
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  13. 13
    Evaluating the relationship between community water and sanitation access and the global burden of antibiotic resistance: an ecological study

    Evaluating the relationship between community water and sanitation access and the global burden of antibiotic resistance: an ecological study af Erica R. Fuhrmeister, Abigail P. Harvey, Maya Nadimpalli, Karin Gallandat, Argaw Ambelu, Benjamin F. Arnold, Joe Brown, Oliver Cumming, Ashlee M. Earl, Gagandeep Kang, Samuel Kariuki, Karen Lévy, Chris Pinto J., Jenna M. Swarthout, Gabriel Trueba, Pablo Tsukayama, Colin J. Worby, Amy J. Pickering

    Udgivet 2023
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  14. 14
    Gut microbiome perturbation, antibiotic resistance, and Escherichia coli strain dynamics associated with international travel: a metagenomic analysis

    Gut microbiome perturbation, antibiotic resistance, and Escherichia coli strain dynamics associated with international travel: a metagenomic analysis af Colin J. Worby, Sushmita Sridhar, Sarah E. Turbett, Margaret V Becker, Lucyna Kogut, Vanessa Sanchez, Ryan A. Bronson, Sowmya R. Rao, Elizabeth Oliver, Allison Taylor Walker, Maroya Spalding Walters, Paul Kelly, Daniel T. Leung, Mark Knouse, Stefan Hagmann, Jason B. Harris, Edward T. Ryan, Ashlee M. Earl, Regina C. LaRocque

    Udgivet 2023
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  15. 15
    Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women

    Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women af Colin J. Worby, Henry L. Schreiber, Timothy J. Straub, Lucas R. van Dijk, Ryan A. Bronson, Benjamin S. Olson, Jerome S. Pinkner, Chloe L. P. Obernuefemann, Vanessa L. Muñoz, Alexandra E. Paharik, Philippe Azimzadeh, Bruce J. Walker, Christopher A. Desjardins, Wen‐Chi Chou, Karla Bergeron, Sinéad B. Chapman, Aleksandra Klim, Abigail L. Manson, Thomas J. Hannan, Thomas M. Hooton, Andrew L. Kau, H. Henry Lai, Karen Dodson, Scott J. Hultgren, Ashlee M. Earl

    Udgivet 2022
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  16. 16
    Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance

    Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance af Rauf Salamzade, Abigail L. Manson, Bruce J. Walker, Thea Brennan-Krohn, Colin J. Worby, Peijun Ma, Lorrie L. He, Terrance Shea, James Qu, Sinéad B. Chapman, Whitney Howe, Sarah Young, Jenna I. Wurster, Mary L. Delaney, Sanjat Kanjilal, Andrew B. Onderdonk, Cassiana E. Bittencourt, Gabrielle Gussin, Diane Kim, Ellena M. Peterson, Mary Jane Ferraro, David C. Hooper, Erica S. Shenoy, Christina A. Cuomo, Lisa A. Cosimi, Susan S. Huang, James E. Kirby, Virginia Pierce, Roby P. Bhattacharyya, Ashlee M. Earl

    Udgivet 2022
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