Ngā hua rapu - Coghlan, Avril

Nematode genome evolution. mā Coghlan, Avril

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Genomix: a method for combining gene-finders’ predictions, which uses evolutionary conservation of sequence and intron–exon structure mā Coghlan, Avril, Durbin, Richard

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Fourfold Faster Rate of Genome Rearrangement in Nematodes Than in Drosophila mā Coghlan, Avril, Wolfe, Kenneth H.

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Origins of recently gained introns in Caenorhabditis mā Coghlan, Avril, Wolfe, Kenneth H.

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nGASP – the nematode genome annotation assessment project mā Coghlan, Avril, Fiedler, Tristan J, McKay, Sheldon J, Flicek, Paul, Harris, Todd W, Blasiar, Darin, Stein, Lincoln D

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Large CRISPR-Cas-induced deletions in the oxamniquine resistance locus of the human parasite Schistosoma mansoni mā Sankaranarayanan, Geetha, Coghlan, Avril, Driguez, Patrick, Lotkowska, Magda E., Sanders, Mandy, Holroyd, Nancy, Tracey, Alan, Berriman, Matthew, Rinaldi, Gabriel

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Duplication and Retention Biases of Essential and Non-Essential Genes Revealed by Systematic Knockdown Analyses mā Woods, Shane, Coghlan, Avril, Rivers, David, Warnecke, Tobias, Jeffries, Sean J., Kwon, Taejoon, Rogers, Anthony, Hurst, Laurence D., Ahringer, Julie

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Quorum sensing N-Acyl homoserine lactones are a new class of anti-schistosomal mā Whiteland, Helen, Crusco, Alessandra, Bloemberg, Lisa W., Tibble-Howlings, Jamie, Forde-Thomas, Josephine, Coghlan, Avril, Murphy, Patrick J., Hoffmann, Karl F.

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Characterization of Pro-Inflammatory Flagellin Proteins Produced by Lactobacillus ruminis and Related Motile Lactobacilli mā Neville, B. Anne, Forde, Brian M., Claesson, Marcus J., Darby, Trevor, Coghlan, Avril, Nally, Kenneth, Ross, R. Paul, O’Toole, Paul W.

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Large-scale RNAi screening uncovers therapeutic targets in the parasite Schistosoma mansoni mā Wang, Jipeng, Paz, Carlos, Padalino, Gilda, Coghlan, Avril, Lu, Zhigang, Gradinaru, Irina, Collins, Julie N.R., Berriman, Matthew, Hoffmann, Karl F., Collins, James J.

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Genome sequences and comparative genomics of two Lactobacillus ruminis strains from the bovine and human intestinal tracts mā Forde, Brian M, Neville, B Anne, O’ Donnell, Michelle M, Riboulet-Bisson, E, Claesson, M J, Coghlan, Avril, Ross, R Paul, O’ Toole, Paul W

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TreeFam: a curated database of phylogenetic trees of animal gene families mā Li, Heng, Coghlan, Avril, Ruan, Jue, Coin, Lachlan James, Hériché, Jean-Karim, Osmotherly, Lara, Li, Ruiqiang, Liu, Tao, Zhang, Zhang, Bolund, Lars, Wong, Gane Ka-Shu, Zheng, Weimou, Dehal, Paramvir, Wang, Jun, Durbin, Richard

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Daily rhythms in gene expression of the human parasite Schistosoma mansoni mā Rawlinson, Kate A., Reid, Adam J., Lu, Zhigang, Driguez, Patrick, Wawer, Anna, Coghlan, Avril, Sankaranarayanan, Geetha, Buddenborg, Sarah K., Soria, Carmen Diaz, McCarthy, Catherine, Holroyd, Nancy, Sanders, Mandy, Hoffmann, Karl F., Wilcockson, David, Rinaldi, Gabriel, Berriman, Matthew

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Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni mā Diaz Soria, Carmen Lidia, Lee, Jayhun, Chong, Tracy, Coghlan, Avril, Tracey, Alan, Young, Matthew D., Andrews, Tallulah, Hall, Christopher, Ng, Bee Ling, Rawlinson, Kate, Doyle, Stephen R., Leonard, Steven, Lu, Zhigang, Bennett, Hayley M., Rinaldi, Gabriel, Newmark, Phillip A., Berriman, Matthew

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TreeFam: 2008 Update mā Ruan, Jue, Li, Heng, Chen, Zhongzhong, Coghlan, Avril, Coin, Lachlan James M., Guo, Yiran, Hériché, Jean-Karim, Hu, Yafeng, Kristiansen, Karsten, Li, Ruiqiang, Liu, Tao, Moses, Alan, Qin, Junjie, Vang, Søren, Vilella, Albert J., Ureta-Vidal, Abel, Bolund, Lars, Wang, Jun, Durbin, Richard

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Programmed genome editing of the omega-1 ribonuclease of the blood fluke, Schistosoma mansoni mā Ittiprasert, Wannaporn, Mann, Victoria H, Karinshak, Shannon E, Coghlan, Avril, Rinaldi, Gabriel, Sankaranarayanan, Geetha, Chaidee, Apisit, Tanno, Toshihiko, Kumkhaek, Chutima, Prangtaworn, Pannathee, Mentink-Kane, Margaret M, Cochran, Christina J, Driguez, Patrick, Holroyd, Nancy, Tracey, Alan, Rodpai, Rutchanee, Everts, Bart, Hokke, Cornelis H, Hoffmann, Karl F, Berriman, Matthew, Brindley, Paul J

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The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion mā Bennett, Hayley M, Mok, Hoi Ping, Gkrania-Klotsas, Effrossyni, Tsai, Isheng J, Stanley, Eleanor J, Antoun, Nagui M, Coghlan, Avril, Harsha, Bhavana, Traini, Alessandra, Ribeiro, Diogo M, Steinbiss, Sascha, Lucas, Sebastian B, Allinson, Kieren SJ, Price, Stephen J, Santarius, Thomas S, Carmichael, Andrew J, Chiodini, Peter L, Holroyd, Nancy, Dean, Andrew F, Berriman, Matthew

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The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics mā Stein, Lincoln D, Bao, Zhirong, Blasiar, Darin, Blumenthal, Thomas, Brent, Michael R, Chen, Nansheng, Chinwalla, Asif, Clarke, Laura, Clee, Chris, Coghlan, Avril, Coulson, Alan, D'Eustachio, Peter, Fitch, David H. A, Fulton, Lucinda A, Fulton, Robert E, Griffiths-Jones, Sam, Harris, Todd W, Hillier, LaDeana W, Kamath, Ravi, Kuwabara, Patricia E, Mardis, Elaine R, Marra, Marco A, Miner, Tracie L, Minx, Patrick, Mullikin, James C, Plumb, Robert W, Rogers, Jane, Schein, Jacqueline E, Sohrmann, Marc, Spieth, John, Stajich, Jason E, Wei, Chaochun, Willey, David, Wilson, Richard K, Durbin, Richard, Waterston, Robert H

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The Genomic Basis of Parasitism in the Strongyloides Clade of Nematodes mā Hunt, Vicky L., Tsai, Isheng J., Coghlan, Avril, Reid, Adam J., Holroyd, Nancy, Foth, Bernardo J., Tracey, Alan, Cotton, James A., Stanley, Eleanor J., Beasley, Helen, Bennett, Hayley M., Brooks, Karen, Harsha, Bhavana, Kajitani, Rei, Kulkarni, Arpita, Harbecke, Dorothee, Nagayasu, Eiji, Nichol, Sarah, Ogura, Yoshitoshi, Quail, Michael A., Randle, Nadine, Xia, Dong, Brattig, Norbert W., Soblik, Hanns, Ribeiro, Diogo M., Sanchez-Flores, Alejandro, Hayashi, Tetsuya, Itoh, Takehiko, Denver, Dee R., Grant, Warwick, Stoltzfus, Jonathan D., Lok, James B., Murayama, Haruhiko, Wastling, Jonathan, Streit, Adrian, Kikuchi, Taisei, Viney, Mark, Berriman, Matthew

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The genome of the blood fluke Schistosoma mansoni mā Berriman, Matthew, Haas, Brian J., LoVerde, Philip T., Wilson, R. Alan, Dillon, Gary P., Cerqueira, Gustavo C., Mashiyama, Susan T., Al-Lazikani, Bissan, Andrade, Luiza F., Ashton, Peter D., Aslett, Martin A., Bartholomeu, Daniella C., Blandin, Gaelle, Caffrey, Conor R., Coghlan, Avril, Coulson, Richard, Day, Tim A., Delcher, Art, DeMarco, Ricardo, Djikeng, Appoliniare, Eyre, Tina, Gamble, John A., Ghedin, Elodie, Gu, Yong, Hertz-Fowler, Christiane, Hirai, Hirohisha, Hirai, Yuriko, Houston, Robin, Ivens, Alasdair, Johnston, David A., Lacerda, Daniela, Macedo, Camila D., McVeigh, Paul, Ning, Zemin, Oliveira, Guilherme, Overington, John P., Parkhill, Julian, Pertea, Mihaela, Pierce, Raymond J., Protasio, Anna V., Quail, Michael A., Rajandream, Marie-Adèle, Rogers, Jane, Sajid, Mohammed, Salzberg, Steven L., Stanke, Mario, Tivey, Adrian R., White, Owen, Williams, David L., Wortman, Jennifer, Wu, Wenjie, Zamanian, Mostafa, Zerlotini, Adhemar, Fraser-Liggett, Claire M., Barrell, Barclay G., El-Sayed, Najib M.

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