Ngā hua rapu kaituhi

1

Pan-cancer analysis of expressed somatic nucleotide variants in long intergenic non-coding RNA mā Ching, Travers, Garmire, Lana X.

I whakaputaina 2018

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2

Power analysis and sample size estimation for RNA-Seq differential expression mā Ching, Travers, Huang, Sijia, Garmire, Lana X.

I whakaputaina 2014

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3

Cox-nnet: An artificial neural network method for prognosis prediction of high-throughput omics data mā Ching, Travers, Zhu, Xun, Garmire, Lana X.

I whakaputaina 2018

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4

Using epigenomics data to predict gene expression in lung cancer mā Li, Jeffery, Ching, Travers, Huang, Sijia, Garmire, Lana X

I whakaputaina 2015

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5

Single-Cell Transcriptomics Bioinformatics and Computational Challenges mā Poirion, Olivier B., Zhu, Xun, Ching, Travers, Garmire, Lana

I whakaputaina 2016

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6

Using single nucleotide variations in single-cell RNA-seq to identify subpopulations and genotype-phenotype linkage mā Poirion, Olivier, Zhu, Xun, Ching, Travers, Garmire, Lana X.

I whakaputaina 2018

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7

A Novel Model to Combine Clinical and Pathway-Based Transcriptomic Information for the Prognosis Prediction of Breast Cancer mā Huang, Sijia, Yee, Cameron, Ching, Travers, Yu, Herbert, Garmire, Lana X.

I whakaputaina 2014

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8

mirMark: a site-level and UTR-level classifier for miRNA target prediction mā Menor, Mark, Ching, Travers, Zhu, Xun, Garmire, David, Garmire, Lana X

I whakaputaina 2014

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9

Detecting heterogeneity in single-cell RNA-Seq data by non-negative matrix factorization mā Zhu, Xun, Ching, Travers, Pan, Xinghua, Weissman, Sherman M., Garmire, Lana

I whakaputaina 2017

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10

kMulti-modal meta-analysis of 1494 hepatocellular carcinoma samples reveals significant impact of consensus driver genes on phenotypes mā Chaudhary, Kumardeep, Poirion, Olivier B., Lu, Liangqun, Huang, Sijia, Ching, Travers, Garmire, Lana X

I whakaputaina 2018

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11

Genome-wide hypermethylation coupled with promoter hypomethylation in the chorioamniotic membranes of early onset pre-eclampsia mā Ching, Travers, Song, Min-Ae, Tiirikainen, Maarit, Molnar, Janos, Berry, Marla, Towner, Dena, Garmire, Lana X.

I whakaputaina 2014

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12

Maternal cardiovascular-related single nucleotide polymorphisms, genes, and pathways associated with early-onset preeclampsia mā Benny, Paula, Yamasato, Kelly, Yunits, Breck, Zhu, Xun, Ching, Travers, Garmire, Lana X., Berry, Marla J., Towner, Dena

I whakaputaina 2019

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13

Genome-scale hypomethylation in the cord blood DNAs associated with early onset preeclampsia mā Ching, Travers, Ha, James, Song, Min-Ae, Tiirikainen, Maarit, Molnar, Janos, Berry, Marla J, Towner, Dena, Garmire, Lana X

I whakaputaina 2015

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14

Pan-Cancer Analyses Reveal Long Intergenic Non-Coding RNAs Relevant to Tumor Diagnosis, Subtyping and Prognosis mā Ching, Travers, Peplowska, Karolina, Huang, Sijia, Zhu, Xun, Shen, Yi, Molnar, Janos, Yu, Herbert, Tiirikainen, Maarit, Fogelgren, Ben, Fan, Rong, Garmire, Lana X.

I whakaputaina 2016

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15

A Novel FGFR3 Splice Variant Preferentially Expressed in African American Prostate Cancer Drives Aggressive Phenotypes and Docetaxel Resistance mā Olender, Jacqueline, Wang, Bi-Dar, Ching, Travers, Garmire, Lana X., Garofano, Kaitlin, Ji, Youngmi, Knox, Tessa, Latham, Patricia, Nguyen, Kenneth, Rhim, Johng, Lee, Norman H.

I whakaputaina 2019

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16

Analysis of Microarray Data on Gene Expression and Methylation to Identify Long Non-coding RNAs in Non-small Cell Lung Cancer mā Feng, Nannan, Ching, Travers, Wang, Yu, Liu, Ben, Lin, Hongyan, Shi, Oumin, Zhang, Xiaohong, Zheng, Min, Zheng, Xin, Gao, Ming, Zheng, Zhi-jie, Yu, Herbert, Garmire, Lana, Qian, Biyun

I whakaputaina 2016

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17

Alternative splicing promotes tumour aggressiveness and drug resistance in African American prostate cancer mā Wang, Bi-Dar, Ceniccola, Kristin, Hwang, SuJin, Andrawis, Ramez, Horvath, Anelia, Freedman, Jennifer A., Olender, Jacqueline, Knapp, Stefan, Ching, Travers, Garmire, Lana, Patel, Vyomesh, Garcia-Blanco, Mariano A., Patierno, Steven R., Lee, Norman H.

I whakaputaina 2017

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18

Corrigendum: Alternative splicing promotes tumour aggressiveness and drug resistance in African American prostate cancer mā Wang, Bi-Dar, Ceniccola, Kristin, Hwang, SuJin, Andrawis, Ramez, Horvath, Anelia, Freedman, Jennifer A., Olender, Jacqueline, Knapp, Stefan, Ching, Travers, Garmire, Lana, Patel, Vyomesh, Garcia-Blanco, Mariano A., Patierno, Steven R., Lee, Norman H.

I whakaputaina 2017

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19

Minimal Residual Disease Dynamics after Venetoclax-Obinutuzumab Treatment: Extended Off-Treatment Follow-up From the Randomized CLL14 Study mā Al-Sawaf, Othman, Zhang, Can, Lu, Tong, Liao, Michael Z., Panchal, Anesh, Robrecht, Sandra, Ching, Travers, Tandon, Maneesh, Fink, Anna-Maria, Tausch, Eugen, Schneider, Christof, Ritgen, Matthias, Böttcher, Sebastian, Kreuzer, Karl-Anton, Chyla, Brenda, Miles, Dale, Wendtner, Clemens-Martin, Eichhorst, Barbara, Stilgenbauer, Stephan, Jiang, Yanwen, Hallek, Michael, Fischer, Kirsten

I whakaputaina 2021

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20

Th17 cells transdifferentiate into regulatory T cells during resolution of inflammation mā Gagliani, Nicola, Vesely, Maria Carolina Amezcua, Iseppon, Andrea, Brockmann, Leonie, Xu, Hao, Palm, Noah W., de Zoete, Marcel R., Licona-Limón, Paula, Paiva, Ricardo S., Ching, Travers, Weaver, Casey, Zi, Xiaoyuan, Pan, Xinghua, Fan, Rong, Garmire, Lana X., Cotton, Matthew J., Drier, Yotam, Bernstein, Bradley, Geginat, Jens, Stockinger, Brigitta, Esplugues, Enric, Huber, Samuel, Flavell, Richard A.

I whakaputaina 2015

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Ngā hua rapu - Ching, Travers

Pan-cancer analysis of expressed somatic nucleotide variants in long intergenic non-coding RNA mā Ching, Travers, Garmire, Lana X.

Power analysis and sample size estimation for RNA-Seq differential expression mā Ching, Travers, Huang, Sijia, Garmire, Lana X.

Cox-nnet: An artificial neural network method for prognosis prediction of high-throughput omics data mā Ching, Travers, Zhu, Xun, Garmire, Lana X.

Using epigenomics data to predict gene expression in lung cancer mā Li, Jeffery, Ching, Travers, Huang, Sijia, Garmire, Lana X

Single-Cell Transcriptomics Bioinformatics and Computational Challenges mā Poirion, Olivier B., Zhu, Xun, Ching, Travers, Garmire, Lana

Using single nucleotide variations in single-cell RNA-seq to identify subpopulations and genotype-phenotype linkage mā Poirion, Olivier, Zhu, Xun, Ching, Travers, Garmire, Lana X.

A Novel Model to Combine Clinical and Pathway-Based Transcriptomic Information for the Prognosis Prediction of Breast Cancer mā Huang, Sijia, Yee, Cameron, Ching, Travers, Yu, Herbert, Garmire, Lana X.

mirMark: a site-level and UTR-level classifier for miRNA target prediction mā Menor, Mark, Ching, Travers, Zhu, Xun, Garmire, David, Garmire, Lana X

Detecting heterogeneity in single-cell RNA-Seq data by non-negative matrix factorization mā Zhu, Xun, Ching, Travers, Pan, Xinghua, Weissman, Sherman M., Garmire, Lana

kMulti-modal meta-analysis of 1494 hepatocellular carcinoma samples reveals significant impact of consensus driver genes on phenotypes mā Chaudhary, Kumardeep, Poirion, Olivier B., Lu, Liangqun, Huang, Sijia, Ching, Travers, Garmire, Lana X

Genome-wide hypermethylation coupled with promoter hypomethylation in the chorioamniotic membranes of early onset pre-eclampsia mā Ching, Travers, Song, Min-Ae, Tiirikainen, Maarit, Molnar, Janos, Berry, Marla, Towner, Dena, Garmire, Lana X.

Maternal cardiovascular-related single nucleotide polymorphisms, genes, and pathways associated with early-onset preeclampsia mā Benny, Paula, Yamasato, Kelly, Yunits, Breck, Zhu, Xun, Ching, Travers, Garmire, Lana X., Berry, Marla J., Towner, Dena

Genome-scale hypomethylation in the cord blood DNAs associated with early onset preeclampsia mā Ching, Travers, Ha, James, Song, Min-Ae, Tiirikainen, Maarit, Molnar, Janos, Berry, Marla J, Towner, Dena, Garmire, Lana X

Pan-Cancer Analyses Reveal Long Intergenic Non-Coding RNAs Relevant to Tumor Diagnosis, Subtyping and Prognosis mā Ching, Travers, Peplowska, Karolina, Huang, Sijia, Zhu, Xun, Shen, Yi, Molnar, Janos, Yu, Herbert, Tiirikainen, Maarit, Fogelgren, Ben, Fan, Rong, Garmire, Lana X.

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