Search Results - Chaolin Zhang

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  1. 1
    Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data

    Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data by Chaolin Zhang, Robert B. Darnell

    Published 2011
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  2. 2
    mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data

    mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data by Huijuan Feng, Xuegong Zhang, Chaolin Zhang

    Published 2015
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  3. 3
    Microexons: discovery, regulation, and function

    Microexons: discovery, regulation, and function by Dmytro Ustianenko, Sebastien M. Weyn‐Vanhentenryck, Chaolin Zhang

    Published 2017
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  4. 4
    Systematic reconstruction of autism biology from massive genetic mutation profiles

    Systematic reconstruction of autism biology from massive genetic mutation profiles by Weijun Luo, Chaolin Zhang, Yong‐hui Jiang, Cory Brouwer

    Published 2018
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  5. 5
    Prediction of clustered RNA-binding protein motif sites in the mammalian genome

    Prediction of clustered RNA-binding protein motif sites in the mammalian genome by Chaolin Zhang, Kuang‐Yung Lee, Maurice S. Swanson, Robert B. Darnell

    Published 2013
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  6. 6
    CLIP Tool Kit (CTK): a flexible and robust pipeline to analyze CLIP sequencing data

    CLIP Tool Kit (CTK): a flexible and robust pipeline to analyze CLIP sequencing data by Ankeeta Shah, Yingzhi Qian, Sebastien M. Weyn‐Vanhentenryck, Chaolin Zhang

    Published 2016
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  7. 7
    Characteristics of coal resources in China and statistical analysis and preventive measures for coal mine accidents

    Characteristics of coal resources in China and statistical analysis and preventive measures for coal mine accidents by Chaolin Zhang, Peter Wang, Enyuan Wang, Dapeng Chen, Chao Li

    Published 2023
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  8. 8
    RNA landscape of evolution for optimal exon and intron discrimination

    RNA landscape of evolution for optimal exon and intron discrimination by Chaolin Zhang, Wen‐Hsiung Li, Adrian R. Krainer, Michael Q. Zhang

    Published 2008
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  9. 9
    OLego: fast and sensitive mapping of spliced mRNA-Seq reads using small seeds

    OLego: fast and sensitive mapping of spliced mRNA-Seq reads using small seeds by Jie Wu, Olga Anczuków, Adrian R. Krainer, Michael Q. Zhang, Chaolin Zhang

    Published 2013
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  10. 10
    Complexity and graded regulation of neuronal cell-type–specific alternative splicing revealed by single-cell RNA sequencing

    Complexity and graded regulation of neuronal cell-type–specific alternative splicing revealed by single-cell RNA sequencing by Huijuan Feng, Daniel F. Moakley, Shuonan Chen, Melissa G. McKenzie, Vilas Menon, Chaolin Zhang

    Published 2021
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  11. 11
    Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis

    Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis by Michael J. Moore, Chaolin Zhang, Emily C. Gantman, Aldo Mele, Jennifer C. Darnell, Robert B. Darnell

    Published 2014
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  12. 12
    Progressive impairment of muscle regeneration in muscleblind-like 3 isoform knockout mice

    Progressive impairment of muscle regeneration in muscleblind-like 3 isoform knockout mice by Michael G. Poulos, Ranjan Batra, Moyi Li, Yuan Yuan, Chaolin Zhang, Robert B. Darnell, Maurice S. Swanson

    Published 2013
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  13. 13
    An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers

    An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers by Philip J Smith, Chaolin Zhang, Jinhua Wang, Shern L. Chew, Michael Q. Zhang, Adrian R. Krainer

    Published 2006
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  14. 14
    NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure

    NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure by Taesun Eom, Chaolin Zhang, Huidong Wang, Kenneth Lay, John J. Fak, Jeffrey L. Noebels, Robert B. Darnell

    Published 2013
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  15. 15
    Stage-specific requirement for Mettl3-dependent m6A mRNA methylation during haematopoietic stem cell differentiation

    Stage-specific requirement for Mettl3-dependent m6A mRNA methylation during haematopoietic stem cell differentiation by Heather Lee, Suying Bao, Yingzhi Qian, Shay Geula, Juliana Leslie, Chaolin Zhang, Jacob H. Hanna, Lei Ding

    Published 2019
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  16. 16
    Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines

    Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines by John C. Castle, Chaolin Zhang, Jyoti Shah, Amit Kulkarni, Auinash Kalsotra, Thomas A. Cooper, Jason M. Johnson

    Published 2008
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  17. 17
    Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain

    Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain by Donny D. Licatalosi, Masato Yano, John J. Fak, Aldo Mele, Sarah E. Grabinski, Chaolin Zhang, Robert B. Darnell

    Published 2012
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  18. 18
    Study of FoxA Pioneer Factor at Silent Genes Reveals Rfx-Repressed Enhancer at Cdx2 and a Potential Indicator of Esophageal Adenocarcinoma Development

    Study of FoxA Pioneer Factor at Silent Genes Reveals Rfx-Repressed Enhancer at Cdx2 and a Potential Indicator of Esophageal Adenocarcinoma Development by Jason A. Watts, Chaolin Zhang, Andres J. Klein–Szanto, Jay D. Kormish, Jian Fu, Michael Q. Zhang, Kenneth S. Zaret

    Published 2011
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  19. 19
    Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2

    Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2 by Chaolin Zhang, Zuo‐Feng Zhang, John C. Castle, Shuying Sun, Jason M. Johnson, Adrian R. Krainer, Michael Q. Zhang

    Published 2008
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  20. 20
    LIN28 Selectively Modulates a Subclass of Let-7 MicroRNAs

    LIN28 Selectively Modulates a Subclass of Let-7 MicroRNAs by Dmytro Ustianenko, Hua‐Sheng Chiu, Thomas Treiber, Sebastien M. Weyn‐Vanhentenryck, Nora Treiber, Gunter Meister, Pavel Sumazin, Chaolin Zhang

    Published 2018
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