检索结果 - Cenk Sahinalp

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  1. 1
    Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution

    Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution 由 Fereydoun Hormozdiari, Petra Berenbrink, Nataša Pržulj, S. Cenk Şahinalp

    出版 2007
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  2. 2
    A partition function algorithm for interacting nucleic acid strands

    A partition function algorithm for interacting nucleic acid strands 由 Hamidreza Chitsaz, Raheleh Salari, S. Cenk Şahinalp, Rolf Backofen

    出版 2009
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    Artigo
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  3. 3
    CoLoRMap: Correcting Long Reads by Mapping short reads

    CoLoRMap: Correcting Long Reads by Mapping short reads 由 Ehsan Haghshenas, Faraz Hach, S. Cenk Şahinalp, Cédric Chauve

    出版 2016
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    Artigo
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  4. 4
    Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

    Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes 由 Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    出版 2009
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  5. 5
    Biomolecular network motif counting and discovery by color coding

    Biomolecular network motif counting and discovery by color coding 由 Noga Alon, Phuong Dao, Iman Hajirasouliha, Fereydoun Hormozdiari, S. Cenk Şahinalp

    出版 2008
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  6. 6
    Integrative inference of subclonal tumour evolution from single-cell and bulk sequencing data

    Integrative inference of subclonal tumour evolution from single-cell and bulk sequencing data 由 Salem Malikić, Katharina Jahn, Jack Kuipers, S. Cenk Ṣahinalp, Niko Beerenwinkel

    出版 2019
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  7. 7
    Simultaneous structural variation discovery among multiple paired-end sequenced genomes

    Simultaneous structural variation discovery among multiple paired-end sequenced genomes 由 Fereydoun Hormozdiari, Iman Hajirasouliha, Andrew McPherson, Evan E. Eichler, S. Cenk Şahinalp

    出版 2011
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  8. 8
    Big data in basic and translational cancer research

    Big data in basic and translational cancer research 由 Peng Jiang, Sanju Sinha, Kenneth Aldape, Sridhar Hannenhalli, S. Cenk Şahinalp, Eytan Ruppin

    出版 2022
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    Revisão
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  9. 9
    mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications

    mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications 由 Faraz Hach, Iman Sarrafi, Farhad Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    出版 2014
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  10. 10
    Optimally discriminative subnetwork markers predict response to chemotherapy

    Optimally discriminative subnetwork markers predict response to chemotherapy 由 Phuong Dao, Kendric Wang, Colin C. Collins, Martin Ester, Anna Lapuk, S. Cenk Sahinalp

    出版 2011
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  11. 11
    Combinatorial Detection of Conserved Alteration Patterns for Identifying Cancer Subnetworks

    Combinatorial Detection of Conserved Alteration Patterns for Identifying Cancer Subnetworks 由 Hodzic, Ermin, Shrestha, Raunak, Zhu, Kaiyuan, Cheng, Kuoyuan, Collins, Colin C, Cenk Sahinalp, S

    出版 2019
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    Text
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  12. 12
    mrsFAST: a cache-oblivious algorithm for short-read mapping

    mrsFAST: a cache-oblivious algorithm for short-read mapping 由 Faraz Hach, Fereydoun Hormozdiari, Can Alkan, Farhad Hormozdiari, İnanç Birol, Evan E. Eichler, S. Cenk Şahinalp

    出版 2010
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  13. 13
    Cypiripi: exact genotyping of <i>CYP2D6</i> using high-throughput sequencing data

    Cypiripi: exact genotyping of <i>CYP2D6</i> using high-throughput sequencing data 由 Ibrahim Numanagić, Salem Malikić, Victoria M. Pratt, Todd C. Skaar, David A. Flockhart, S. Cenk Şahinalp

    出版 2015
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    Artigo
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  14. 14
    nFuse: Discovery of complex genomic rearrangements in cancer using high-throughput sequencing

    nFuse: Discovery of complex genomic rearrangements in cancer using high-throughput sequencing 由 Andrew McPherson, Chunxiao Wu, Alexander W. Wyatt, Sohrab P. Shah, Colin C. Collins, S. Cenk Şahinalp

    出版 2012
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  15. 15
    Detection and characterization of novel sequence insertions using paired-end next-generation sequencing

    Detection and characterization of novel sequence insertions using paired-end next-generation sequencing 由 Iman Hajirasouliha, Fereydoun Hormozdiari, Can Alkan, Jeffrey M. Kidd, İnanç Birol, Evan E. Eichler, S. Cenk Şahinalp

    出版 2010
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  16. 16
    Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

    Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery 由 Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach, Deniz Yörükoğlu, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    出版 2010
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  17. 17
    An efficient genotyper and star-allele caller for pharmacogenomics

    An efficient genotyper and star-allele caller for pharmacogenomics 由 Ananth Hari, Qinghui Zhou, Nina Gonzaludo, John Harting, Stuart A. Scott, Xiang Qin, Stephen W. Scherer, S. Cenk Şahinalp, Ibrahim Numanagić

    出版 2023
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  18. 18
    Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome

    Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome 由 Ge Liu, NISC Comparative Sequencing Program, Shaying Zhao, Jeffrey A. Bailey, S. Cenk Şahinalp, Can Alkan, Eray Tüzün, Eric D. Green, Evan E. Eichler

    出版 2003
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    Artigo
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  19. 19
    HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology

    HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology 由 Raunak Shrestha, Ermin Hodzic, Thomas Sauerwald, Phuong Dao, Kendric Wang, Jake Yeung, Shawn Anderson, Fabio Vandin, Gholamreza Haffari, Colin C. Collins, S. Cenk Şahinalp

    出版 2017
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  20. 20
    PhISCS: a combinatorial approach for subperfect tumor phylogeny reconstruction via integrative use of single-cell and bulk sequencing data

    PhISCS: a combinatorial approach for subperfect tumor phylogeny reconstruction via integrative use of single-cell and bulk sequencing data 由 Salem Malikić, Farid Rashidi Mehrabadi, Simone Ciccolella, Md. Khaledur Rahman, Camir Ricketts, Ehsan Haghshenas, Daniel N. Seidman, Faraz Hach, Iman Hajirasouliha, S. Cenk Şahinalp

    出版 2019
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