Ngā hua rapu - Can Alkan

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  1. 1
    Limitations of next-generation genome sequence assembly

    Limitations of next-generation genome sequence assembly mā Can Alkan, Saba Sajjadian, Evan E. Eichler

    I whakaputaina 2010
    Whiwhi kuputuhi katoa
    Artigo
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  2. 2
    Genome structural variation discovery and genotyping

    Genome structural variation discovery and genotyping mā Can Alkan, Bradley P. Coe, Evan E. Eichler

    I whakaputaina 2011
    Whiwhi kuputuhi katoa
    Revisão
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  3. 3
    Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

    Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes mā Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    I whakaputaina 2009
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  4. 4
    Shouji: a fast and efficient pre-alignment filter for sequence alignment

    Shouji: a fast and efficient pre-alignment filter for sequence alignment mā Mohammed Alser, Hasan Hassan, Akash Kumar, Onur Mutlu, Can Alkan

    I whakaputaina 2019
    Whiwhi kuputuhi katoa
    Artigo
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  5. 5
    Nanopore sequencing technology and tools for genome assembly: computational analysis of the current state, bottlenecks and future directions

    Nanopore sequencing technology and tools for genome assembly: computational analysis of the current state, bottlenecks and future directions mā Damla Senol Cali, Jeremie S. Kim, Saugata Ghose, Can Alkan, Onur Mutlu

    I whakaputaina 2018
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Revisão
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  6. 6
    Accelerating read mapping with FastHASH

    Accelerating read mapping with FastHASH mā Hongyi Xin, Donghyuk Lee, Farhad Hormozdiari, Samihan Yedkar, Onur Mutlu, Can Alkan

    I whakaputaina 2013
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  7. 7
    Comparative analysis of <i>Alu</i> repeats in primate genomes

    Comparative analysis of <i>Alu</i> repeats in primate genomes mā George E. Liu, Can Alkan, Jiang Lu, Shaying Zhao, Evan E. Eichler

    I whakaputaina 2009
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  8. 8
    GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping

    GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping mā Mohammed Alser, Hasan Hassan, Hongyi Xin, Oğuz Ergin, Onur Mutlu, Can Alkan

    I whakaputaina 2017
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  9. 9
    mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications

    mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications mā Faraz Hach, Iman Sarrafi, Farhad Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    I whakaputaina 2014
    Whiwhi kuputuhi katoa
    Artigo
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  10. 10
    Fast characterization of segmental duplications in genome assemblies

    Fast characterization of segmental duplications in genome assemblies mā Ibrahim Numanagić, Alim Şükrücan Gökkaya, Lillian Zhang, Bonnie Berger, Can Alkan, Faraz Hach

    I whakaputaina 2018
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  11. 11
    Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping

    Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping mā Hongyi Xin, John Greth, John Emmons, Gennady Pekhimenko, Carl Kingsford, Can Alkan, Onur Mutlu

    I whakaputaina 2015
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  12. 12
    mrsFAST: a cache-oblivious algorithm for short-read mapping

    mrsFAST: a cache-oblivious algorithm for short-read mapping mā Faraz Hach, Fereydoun Hormozdiari, Can Alkan, Farhad Hormozdiari, İnanç Birol, Evan E. Eichler, S. Cenk Şahinalp

    I whakaputaina 2010
    Whiwhi kuputuhi katoa
    Carta
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  13. 13
    Accelerating Genome Analysis: A Primer on an Ongoing Journey

    Accelerating Genome Analysis: A Primer on an Ongoing Journey mā Mohammed Alser, Zülal Bingöl, Damla Senol Cali, Jeremie Kim, Saugata Ghose, Can Alkan, Onur Mutlu

    I whakaputaina 2020
    Whiwhi kuputuhi katoa
    Artigo
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  14. 14
    Detection and characterization of novel sequence insertions using paired-end next-generation sequencing

    Detection and characterization of novel sequence insertions using paired-end next-generation sequencing mā Iman Hajirasouliha, Fereydoun Hormozdiari, Can Alkan, Jeffrey M. Kidd, İnanç Birol, Evan E. Eichler, S. Cenk Şahinalp

    I whakaputaina 2010
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  15. 15
    Apollo: a sequencing-technology-independent, scalable and accurate assembly polishing algorithm

    Apollo: a sequencing-technology-independent, scalable and accurate assembly polishing algorithm mā Can Fırtına, Jeremie S. Kim, Mohammed Alser, Damla Senol Cali, A. Ercüment Çiçek, Can Alkan, Onur Mutlu

    I whakaputaina 2020
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  16. 16
    Early postzygotic mutations contribute to de novo variation in a healthy monozygotic twin pair

    Early postzygotic mutations contribute to de novo variation in a healthy monozygotic twin pair mā Gülşah M Dal, Bekir Ergüner, Mahmut Şamil Sağıroğlu, Bayram Yüksel, Onur Emre Onat, Can Alkan, Tayfun Özçelık

    I whakaputaina 2014
    Whiwhi kuputuhi katoa
    Artigo
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  17. 17
    Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

    Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery mā Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach, Deniz Yörükoğlu, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    I whakaputaina 2010
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  18. 18
    GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies

    GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies mā Jeremie S. Kim, Damla Senol Cali, Hongyi Xin, Donghyuk Lee, Saugata Ghose, Mohammed Alser, Hasan Hassan, Oğuz Ergin, Can Alkan, Onur Mutlu

    I whakaputaina 2018
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  19. 19
    Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome

    Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome mā Ge Liu, NISC Comparative Sequencing Program, Shaying Zhao, Jeffrey A. Bailey, S. Cenk Şahinalp, Can Alkan, Eray Tüzün, Eric D. Green, Evan E. Eichler

    I whakaputaina 2003
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  20. 20
    Diversity of Human Copy Number Variation and Multicopy Genes

    Diversity of Human Copy Number Variation and Multicopy Genes mā Peter H. Sudmant, Jacob O. Kitzman, Francesca Antonacci, Can Alkan, Maika Malig, Anya Tsalenko, Nick Sampas, Laurakay Bruhn, Jay Shendure, Evan E. Eichler

    I whakaputaina 2010
    Whiwhi kuputuhi katoa
    Artigo
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