Sökresultat - Birgit Strodel

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  1. 1
    Comparison of force fields for Alzheimer's A: A case study for intrinsically disordered proteins

    Comparison of force fields for Alzheimer's A: A case study for intrinsically disordered proteins av Martín Carballo‐Pacheco, Birgit Strodel

    Publicerad 2016
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  2. 2
    How the amyloid-β peptide and membranes affect each other: An extensive simulation study

    How the amyloid-β peptide and membranes affect each other: An extensive simulation study av Chetan Poojari, Andreas Kukol, Birgit Strodel

    Publicerad 2012
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  3. 3
    A Kinetic Approach to the Sequence–Aggregation Relationship in Disease-Related Protein Assembly

    A Kinetic Approach to the Sequence–Aggregation Relationship in Disease-Related Protein Assembly av Bogdan Barz, David J. Wales, Birgit Strodel

    Publicerad 2014
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  4. 4
    Early amyloid β-protein aggregation precedes conformational change

    Early amyloid β-protein aggregation precedes conformational change av Bogdan Barz, Olujide O. Olubiyi, Birgit Strodel

    Publicerad 2014
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  5. 5
    Automated Markov state models for molecular dynamics simulations of aggregation and self-assembly

    Automated Markov state models for molecular dynamics simulations of aggregation and self-assembly av Ushnish Sengupta, Martín Carballo‐Pacheco, Birgit Strodel

    Publicerad 2019
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  6. 6
    Development and Application of a Nonbonded Cu<sup>2+</sup> Model That Includes the Jahn–Teller Effect

    Development and Application of a Nonbonded Cu<sup>2+</sup> Model That Includes the Jahn–Teller Effect av Qinghua Liao, Shina Caroline Lynn Kamerlin, Birgit Strodel

    Publicerad 2015
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  7. 7
    Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations

    Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations av Suman Samantray, Feng Yin, Batuhan Kav, Birgit Strodel

    Publicerad 2020
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  8. 8
    Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment

    Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment av Arghadwip Paul, Suman Samantray, Marco Anteghini, Mohammed Khaled, Birgit Strodel

    Publicerad 2021
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  9. 9
    Structural features determining thermal adaptation of esterases

    Structural features determining thermal adaptation of esterases av Filip Kovačić, Agathe Mandrysch, Chetan Poojari, Birgit Strodel, Karl‐Erich Jaeger

    Publicerad 2015
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  10. 10
    Computer simulations of protein–membrane systems

    Computer simulations of protein–membrane systems av Jennifer Loschwitz, Olujide O. Olubiyi, Jochen S. Hub, Birgit Strodel, Chetan Poojari

    Publicerad 2020
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  11. 11
    Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids

    Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids av Dieter Willbold, Birgit Strodel, Gunnar F. Schröder, Wolfgang Hoyer, Henrike Heise

    Publicerad 2021
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  12. 12
    Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane

    Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane av Hebah Fatafta, Mohammed Khaled, Michael C. Owen, Abdallah Sayyed–Ahmad, Birgit Strodel

    Publicerad 2021
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  13. 13
    Shuffling Active Site Substate Populations Affects Catalytic Activity: The Case of Glucose Oxidase

    Shuffling Active Site Substate Populations Affects Catalytic Activity: The Case of Glucose Oxidase av Dušan Petrović, David A. Frank, Shina Caroline Lynn Kamerlin, Kurt Hoffmann, Birgit Strodel

    Publicerad 2017
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  14. 14
    A Hairpin Motif in the Amyloid-β Peptide Is Important for Formation of Disease-Related Oligomers

    A Hairpin Motif in the Amyloid-β Peptide Is Important for Formation of Disease-Related Oligomers av Mohammed Khaled, Isabel Rönnbäck, Leopold L. Ilag, Astrid Gräslund, Birgit Strodel, Nicklas Österlund

    Publicerad 2023
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  15. 15
    Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis with Markov State Models and Transition Networks

    Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis with Markov State Models and Transition Networks av Suman Samantray, Wibke Schumann, Alexander-Maurice Illig, Martín Carballo‐Pacheco, Arghadwip Paul, Bogdan Barz, Birgit Strodel

    Publicerad 2022
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  16. 16
    Enzyme Architecture: Modeling the Operation of a Hydrophobic Clamp in Catalysis by Triosephosphate Isomerase

    Enzyme Architecture: Modeling the Operation of a Hydrophobic Clamp in Catalysis by Triosephosphate Isomerase av Yashraj Kulkarni, Qinghua Liao, Dušan Petrović, D. Krüger, Birgit Strodel, Tina L. Amyes, John P. Richard, Shina Caroline Lynn Kamerlin

    Publicerad 2017
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  17. 17
    Aβ42 pentamers/hexamers are the smallest detectable oligomers in solution

    Aβ42 pentamers/hexamers are the smallest detectable oligomers in solution av Martin Wolff, Bo Zhang-Haagen, Christina Decker, Bogdan Barz, Mario Schneider, Ralf Biehl, Aurel Rădulescu, Birgit Strodel, Dieter Willbold, Luitgard Nagel‐Steger

    Publicerad 2017
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  18. 18
    Loop Motion in Triosephosphate Isomerase Is Not a Simple Open and Shut Case

    Loop Motion in Triosephosphate Isomerase Is Not a Simple Open and Shut Case av Qinghua Liao, Yashraj Kulkarni, Ushnish Sengupta, Dušan Petrović, Adrian J. Mulholland, Marc W. van der Kamp, Birgit Strodel, Shina Caroline Lynn Kamerlin

    Publicerad 2018
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  19. 19
    Discovery of All-<scp>d</scp>-Peptide Inhibitors of SARS-CoV-2 3C-like Protease

    Discovery of All-<scp>d</scp>-Peptide Inhibitors of SARS-CoV-2 3C-like Protease av Raphael J. Eberle, Marc Sevenich, Ian Gering, Lara Scharbert, Birgit Strodel, Nils‐Alexander Lakomek, Karoline Santur, Jeannine Mohrlüder, Mônika A. Coronado, Dieter Willbold

    Publicerad 2023
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  20. 20
    Structural insights from lipid-bilayer nanodiscs link α-Synuclein membrane-binding modes to amyloid fibril formation

    Structural insights from lipid-bilayer nanodiscs link α-Synuclein membrane-binding modes to amyloid fibril formation av Thibault Viennet, Michael M. Wördehoff, Boran Uluca, Chetan Poojari, Hamed Shaykhalishahi, Dieter Willbold, Birgit Strodel, Henrike Heise, Alexander K. Buell, Wolfgang Hoyer, Manuel Etzkorn

    Publicerad 2018
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