Risultati della ricerca - Birgit Strodel

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  1. 1
    Comparison of force fields for Alzheimer's A: A case study for intrinsically disordered proteins

    Comparison of force fields for Alzheimer's A: A case study for intrinsically disordered proteins di Martín Carballo‐Pacheco, Birgit Strodel

    Pubblicazione 2016
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  2. 2
    How the amyloid-β peptide and membranes affect each other: An extensive simulation study

    How the amyloid-β peptide and membranes affect each other: An extensive simulation study di Chetan Poojari, Andreas Kukol, Birgit Strodel

    Pubblicazione 2012
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  3. 3
    A Kinetic Approach to the Sequence–Aggregation Relationship in Disease-Related Protein Assembly

    A Kinetic Approach to the Sequence–Aggregation Relationship in Disease-Related Protein Assembly di Bogdan Barz, David J. Wales, Birgit Strodel

    Pubblicazione 2014
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  4. 4
    Early amyloid β-protein aggregation precedes conformational change

    Early amyloid β-protein aggregation precedes conformational change di Bogdan Barz, Olujide O. Olubiyi, Birgit Strodel

    Pubblicazione 2014
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  5. 5
    Automated Markov state models for molecular dynamics simulations of aggregation and self-assembly

    Automated Markov state models for molecular dynamics simulations of aggregation and self-assembly di Ushnish Sengupta, Martín Carballo‐Pacheco, Birgit Strodel

    Pubblicazione 2019
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  6. 6
    Development and Application of a Nonbonded Cu<sup>2+</sup> Model That Includes the Jahn–Teller Effect

    Development and Application of a Nonbonded Cu<sup>2+</sup> Model That Includes the Jahn–Teller Effect di Qinghua Liao, Shina Caroline Lynn Kamerlin, Birgit Strodel

    Pubblicazione 2015
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  7. 7
    Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations

    Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations di Suman Samantray, Feng Yin, Batuhan Kav, Birgit Strodel

    Pubblicazione 2020
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  8. 8
    Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment

    Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment di Arghadwip Paul, Suman Samantray, Marco Anteghini, Mohammed Khaled, Birgit Strodel

    Pubblicazione 2021
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  9. 9
    Structural features determining thermal adaptation of esterases

    Structural features determining thermal adaptation of esterases di Filip Kovačić, Agathe Mandrysch, Chetan Poojari, Birgit Strodel, Karl‐Erich Jaeger

    Pubblicazione 2015
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  10. 10
    Computer simulations of protein–membrane systems

    Computer simulations of protein–membrane systems di Jennifer Loschwitz, Olujide O. Olubiyi, Jochen S. Hub, Birgit Strodel, Chetan Poojari

    Pubblicazione 2020
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  11. 11
    Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids

    Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids di Dieter Willbold, Birgit Strodel, Gunnar F. Schröder, Wolfgang Hoyer, Henrike Heise

    Pubblicazione 2021
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  12. 12
    Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane

    Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane di Hebah Fatafta, Mohammed Khaled, Michael C. Owen, Abdallah Sayyed–Ahmad, Birgit Strodel

    Pubblicazione 2021
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  13. 13
    Shuffling Active Site Substate Populations Affects Catalytic Activity: The Case of Glucose Oxidase

    Shuffling Active Site Substate Populations Affects Catalytic Activity: The Case of Glucose Oxidase di Dušan Petrović, David A. Frank, Shina Caroline Lynn Kamerlin, Kurt Hoffmann, Birgit Strodel

    Pubblicazione 2017
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  14. 14
    A Hairpin Motif in the Amyloid-β Peptide Is Important for Formation of Disease-Related Oligomers

    A Hairpin Motif in the Amyloid-β Peptide Is Important for Formation of Disease-Related Oligomers di Mohammed Khaled, Isabel Rönnbäck, Leopold L. Ilag, Astrid Gräslund, Birgit Strodel, Nicklas Österlund

    Pubblicazione 2023
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  15. 15
    Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis with Markov State Models and Transition Networks

    Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis with Markov State Models and Transition Networks di Suman Samantray, Wibke Schumann, Alexander-Maurice Illig, Martín Carballo‐Pacheco, Arghadwip Paul, Bogdan Barz, Birgit Strodel

    Pubblicazione 2022
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  16. 16
    Enzyme Architecture: Modeling the Operation of a Hydrophobic Clamp in Catalysis by Triosephosphate Isomerase

    Enzyme Architecture: Modeling the Operation of a Hydrophobic Clamp in Catalysis by Triosephosphate Isomerase di Yashraj Kulkarni, Qinghua Liao, Dušan Petrović, D. Krüger, Birgit Strodel, Tina L. Amyes, John P. Richard, Shina Caroline Lynn Kamerlin

    Pubblicazione 2017
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  17. 17
    Aβ42 pentamers/hexamers are the smallest detectable oligomers in solution

    Aβ42 pentamers/hexamers are the smallest detectable oligomers in solution di Martin Wolff, Bo Zhang-Haagen, Christina Decker, Bogdan Barz, Mario Schneider, Ralf Biehl, Aurel Rădulescu, Birgit Strodel, Dieter Willbold, Luitgard Nagel‐Steger

    Pubblicazione 2017
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  18. 18
    Loop Motion in Triosephosphate Isomerase Is Not a Simple Open and Shut Case

    Loop Motion in Triosephosphate Isomerase Is Not a Simple Open and Shut Case di Qinghua Liao, Yashraj Kulkarni, Ushnish Sengupta, Dušan Petrović, Adrian J. Mulholland, Marc W. van der Kamp, Birgit Strodel, Shina Caroline Lynn Kamerlin

    Pubblicazione 2018
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  19. 19
    Discovery of All-<scp>d</scp>-Peptide Inhibitors of SARS-CoV-2 3C-like Protease

    Discovery of All-<scp>d</scp>-Peptide Inhibitors of SARS-CoV-2 3C-like Protease di Raphael J. Eberle, Marc Sevenich, Ian Gering, Lara Scharbert, Birgit Strodel, Nils‐Alexander Lakomek, Karoline Santur, Jeannine Mohrlüder, Mônika A. Coronado, Dieter Willbold

    Pubblicazione 2023
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  20. 20
    Structural insights from lipid-bilayer nanodiscs link α-Synuclein membrane-binding modes to amyloid fibril formation

    Structural insights from lipid-bilayer nanodiscs link α-Synuclein membrane-binding modes to amyloid fibril formation di Thibault Viennet, Michael M. Wördehoff, Boran Uluca, Chetan Poojari, Hamed Shaykhalishahi, Dieter Willbold, Birgit Strodel, Henrike Heise, Alexander K. Buell, Wolfgang Hoyer, Manuel Etzkorn

    Pubblicazione 2018
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