Search Results - Baheti, Saurabh

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  1. 1
    Whole Exome Sequencing Among 26 Patients With Indeterminate Acute Liver Failure: Response to Letter to the Editor

    Whole Exome Sequencing Among 26 Patients With Indeterminate Acute Liver Failure: Response to Letter to the Editor by Rakela, Jorge, Dehankar, Mrunal K., Baheti, Saurabh

    Published 2020
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  2. 2
    From Days to Hours: Reporting Clinically Actionable Variants from Whole Genome Sequencing

    From Days to Hours: Reporting Clinically Actionable Variants from Whole Genome Sequencing by Middha, Sumit, Baheti, Saurabh, Hart, Steven N., Kocher, Jean-Pierre A.

    Published 2014
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  3. 3
    Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data

    Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data by Baheti, Saurabh, Kanwar, Rahul, Goelzenleuchter, Meike, Kocher, Jean-Pierre A., Beutler, Andreas S., Sun, Zhifu

    Published 2016
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  4. 4
    Whole Exome Sequencing Among 26 Patients With Indeterminate Acute Liver Failure: A Pilot Study

    Whole Exome Sequencing Among 26 Patients With Indeterminate Acute Liver Failure: A Pilot Study by Rakela, Jorge, Rule, Jody, Ganger, Daniel, Lau, Julie, Cunningham, Julie, Dehankar, Mrunal, Baheti, Saurabh, Lee, William M.

    Published 2019
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  5. 5
    SoftSearch: Integration of Multiple Sequence Features to Identify Breakpoints of Structural Variations

    SoftSearch: Integration of Multiple Sequence Features to Identify Breakpoints of Structural Variations by Hart, Steven N., Sarangi, Vivekananda, Moore, Raymond, Baheti, Saurabh, Bhavsar, Jaysheel D., Couch, Fergus J., Kocher, Jean-Pierre A.

    Published 2013
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  6. 6
    Aberrant signature methylome by DNMT1 hot spot mutation in hereditary sensory and autonomic neuropathy 1E

    Aberrant signature methylome by DNMT1 hot spot mutation in hereditary sensory and autonomic neuropathy 1E by Sun, Zhifu, Wu, Yanhong, Ordog, Tamas, Baheti, Saurabh, Nie, Jinfu, Duan, Xiaohui, Hojo, Kaori, Kocher, Jean-Pierre, Dyck, Peter J, Klein, Christopher J

    Published 2014
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  7. 7
    SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing

    SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing by Sun, Zhifu, Baheti, Saurabh, Middha, Sumit, Kanwar, Rahul, Zhang, Yuji, Li, Xing, Beutler, Andreas S., Klee, Eric, Asmann, Yan W., Thompson, E. Aubrey, Kocher, Jean-Pierre A.

    Published 2012
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  8. 8
    Perinatal Nutritional Reprogramming of the Epigenome Promotes Subsequent Development of Nonalcoholic Steatohepatitis

    Perinatal Nutritional Reprogramming of the Epigenome Promotes Subsequent Development of Nonalcoholic Steatohepatitis by Gutierrez Sanchez, Luz Helena, Tomita, Kyoko, Guo, Qianqian, Furuta, Kunimaro, Alhuwaish, Husam, Hirsova, Petra, Baheti, Saurabh, Alver, Bonnie, Hlady, Ryan, Robertson, Keith D., Ibrahim, Samar H.

    Published 2018
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  9. 9
    Comprehensive Assessment of Genetic Variants Within TCF4 in Fuchs' Endothelial Corneal Dystrophy

    Comprehensive Assessment of Genetic Variants Within TCF4 in Fuchs' Endothelial Corneal Dystrophy by Wieben, Eric D., Aleff, Ross A., Eckloff, Bruce W., Atkinson, Elizabeth J., Baheti, Saurabh, Middha, Sumit, Brown, William L., Patel, Sanjay V., Kocher, Jean-Pierre A., Baratz, Keith H.

    Published 2014
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  10. 10
    Comprehensively Evaluating cis-Regulatory Variation in the Human Prostate Transcriptome by Using Gene-Level Allele-Specific Expression

    Comprehensively Evaluating cis-Regulatory Variation in the Human Prostate Transcriptome by Using Gene-Level Allele-Specific Expression by Larson, Nicholas B., McDonnell, Shannon, French, Amy J., Fogarty, Zach, Cheville, John, Middha, Sumit, Riska, Shaun, Baheti, Saurabh, Nair, Asha A., Wang, Liang, Schaid, Daniel J., Thibodeau, Stephen N.

    Published 2015
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  11. 11
    HGT-ID: an efficient and sensitive workflow to detect human-viral insertion sites using next-generation sequencing data

    HGT-ID: an efficient and sensitive workflow to detect human-viral insertion sites using next-generation sequencing data by Baheti, Saurabh, Tang, Xiaojia, O’Brien, Daniel R., Chia, Nicholas, Roberts, Lewis R., Nelson, Heidi, Boughey, Judy C., Wang, Liewei, Goetz, Matthew P., Kocher, Jean-Pierre A., Kalari, Krishna R.

    Published 2018
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  12. 12
    Target-enrichment sequencing and copy number evaluation in inherited polyneuropathy

    Target-enrichment sequencing and copy number evaluation in inherited polyneuropathy by Wang, Wei, Wang, Chen, Dawson, D. Brian, Thorland, Erik C., Lundquist, Patrick A., Eckloff, Bruce W., Wu, Yanhong, Baheti, Saurabh, Evans, Jared M., Scherer, Steven S., Dyck, Peter J., Klein, Christopher J.

    Published 2016
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  13. 13
    DNA methylation patterns in human iPSC-derived sensory neuronal differentiation

    DNA methylation patterns in human iPSC-derived sensory neuronal differentiation by Ankam, Soneela, Rovini, Amandine, Baheti, Saurabh, Hrstka, Ron, Wu, Yanhong, Schmidt, Kiley, Wang, Hailong, Madigan, Nicolas, Koenig, Lena-Sophie, Stelzig, Kimberly, Resch, Zachary, Klein, Christopher J., Sun, Zhifu, Staff, Nathan P.

    Published 2019
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  14. 14
    RVboost: RNA-seq variants prioritization using a boosting method

    RVboost: RNA-seq variants prioritization using a boosting method by Wang, Chen, Davila, Jaime I., Baheti, Saurabh, Bhagwate, Aditya V., Wang, Xue, Kocher, Jean-Pierre A., Slager, Susan L., Feldman, Andrew L., Novak, Anne J., Cerhan, James R., Thompson, E. Aubrey, Asmann, Yan W.

    Published 2014
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  15. 15
    New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

    New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice by Kisiel, John B., Raimondo, Massimo, Taylor, William R., Yab, Tracy C., Mahoney, Douglas W., Sun, Zhifu, Middha, Sumit, Baheti, Saurabh, Zou, Hongzhi, Smyrk, Thomas C., Boardman, Lisa A., Petersen, Gloria M., Ahlquist, David A.

    Published 2015
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  16. 16
    Network-directed cis-mediator analysis of normal prostate tissue expression profiles reveals downstream regulatory associations of prostate cancer susceptibility loci

    Network-directed cis-mediator analysis of normal prostate tissue expression profiles reveals downstream regulatory associations of prostate cancer susceptibility loci by Larson, Nicholas B., McDonnell, Shannon K., Fogarty, Zach, Larson, Melissa C., Cheville, John, Riska, Shaun, Baheti, Saurabh, Weber, Alexandra M., Nair, Asha A., Wang, Liang, O’Brien, Daniel, Davila, Jaime, Schaid, Daniel J., Thibodeau, Stephen N.

    Published 2017
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  17. 17
    TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data

    TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data by Asmann, Yan W., Middha, Sumit, Hossain, Asif, Baheti, Saurabh, Li, Ying, Chai, High-Seng, Sun, Zhifu, Duffy, Patrick H., Hadad, Ahmed A., Nair, Asha, Liu, Xiaoyu, Zhang, Yuji, Klee, Eric W., Kalari, Krishna R., Kocher, Jean-Pierre A.

    Published 2012
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  18. 18
    The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data

    The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data by Tang, Xiaojia, Baheti, Saurabh, Shameer, Khader, Thompson, Kevin J., Wills, Quin, Niu, Nifang, Holcomb, Ilona N., Boutet, Stephane C., Ramakrishnan, Ramesh, Kachergus, Jennifer M., Kocher, Jean-Pierre A., Weinshilboum, Richard M., Wang, Liewei, Thompson, E. Aubrey, Kalari, Krishna R.

    Published 2014
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  19. 19
    Fine-mapping of the non-coding variation driving the Caucasian LRRK2 GWAS signal in Parkinson’s disease

    Fine-mapping of the non-coding variation driving the Caucasian LRRK2 GWAS signal in Parkinson’s disease by Heckman, Michael G., Labbé, Catherine, Kolicheski, Ana L., Soto-Beasley, Alexandra I., Walton, Ronald L., Valentino, Rebecca R., Vargas, Emily R., Johnson, Patrick W., Baheti, Saurabh, Sarangi, Vivekananda, Ren, Yingxue, Uitti, Ryan J., Wszolek, Zbigniew K., Ross, Owen A.

    Published 2021
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  20. 20
    Recommendations for performance optimizations when using GATK3.8 and GATK4

    Recommendations for performance optimizations when using GATK3.8 and GATK4 by Heldenbrand, Jacob R, Baheti, Saurabh, Bockol, Matthew A, Drucker, Travis M, Hart, Steven N, Hudson, Matthew E, Iyer, Ravishankar K, Kalmbach, Michael T, Kendig, Katherine I, Klee, Eric W, Mattson, Nathan R, Wieben, Eric D, Wiepert, Mathieu, Wildman, Derek E, Mainzer, Liudmila S

    Published 2019
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