Dahkkiohcama bohtosat :: APM

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LINKS: Scalable, alignment-free scaffolding of draft genomes with long reads Dahkki René L. Warren, Chen Yang, Benjamin P. Vandervalk, Bahar Behsaz, Albert Lagman, Steven J.M. Jones, İnanç Birol

Almmustuhtton 2015

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De Novo Peptide Sequencing Reveals Many Cyclopeptides in the Human Gut and Other Environments Dahkki Bahar Behsaz, Hosein Mohimani, Alexey Gurevich, Andrey D. Prjibelski, Mark Fisher, Fernando Vargas, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner

Almmustuhtton 2019

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A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch Dahkki Mark Fisher, Jingjing Zhang, Nicolas L. Taylor, Mark J. Howard, Oliver Berkowitz, Aleksandra W. Debowski, Bahar Behsaz, James Whelan, Pavel A. Pevzner, Joshua S. Mylne

Almmustuhtton 2018

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metaFlye: scalable long-read metagenome assembly using repeat graphs Dahkki Mikhail Kolmogorov, Derek M. Bickhart, Bahar Behsaz, Alexey Gurevich, Mikhail Rayko, Sung Bong Shin, Kristen L. Kuhn, Jeffrey Yuan, Evgeny Polevikov, Timothy P. L. Smith, Pavel A. Pevzner

Almmustuhtton 2020

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Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery Dahkki Bahar Behsaz, Edna Bode, Alexey Gurevich, Yan‐Ni Shi, Florian Grundmann, Deepa Acharya, Andrés Mauricio Caraballo‐Rodríguez, Amina Bouslimani, Morgan Panitchpakdi, Annabell Linck, Changhui Guan, Julia Oh, Pieter C. Dorrestein, Helge B. Bode, Pavel A. Pevzner, Hosein Mohimani

Almmustuhtton 2021

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HypoRiPPAtlas as an Atlas of hypothetical natural products for mass spectrometry database search Dahkki Yi-Yuan Lee, Mustafa Güler, Desnor N. Chigumba, Shen Wang, Neel Mittal, Cameron Miller, Benjamin Krummenacher, Haodong Liu, Liu Cao, Aditya Kannan, Keshav Narayan, Samuel T. Slocum, Bryan L. Roth, Alexey Gurevich, Bahar Behsaz, Roland D. Kersten, Hosein Mohimani

Almmustuhtton 2023

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Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS Dahkki Donghui Yan, Muqing Zhou, Abhinav Adduri, Yihao Zhuang, Mustafa Güler, Sitong Liu, Hyonyoung Shin, Torin Kovach, Gloria Oh, Xiao Liu, Yuting Deng, Xiaofeng Wang, Liu Cao, David H. Sherman, Pamela J. Schultz, Roland D. Kersten, Jason A. Clement, Ashootosh Tripathi, Bahar Behsaz, Hosein Mohimani

Almmustuhtton 2024

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American Gut: an Open Platform for Citizen-Science Microbiome Research Dahkki Daniel McDonalda, Embriette R. Hyde, Justine W. Debelius, James T. Morton, Antonio González, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kościółek, Joshua Ladau, Jeff D. Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, José A. Navas-Molina, Tanya T. Nguyen, Shyamal D. Peddada, Pavel A. Pevzner, Katherine S. Pollard, Ali Rahnavard, Adam Robbins‐Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke Thompson, Anupriya Tripathi, Yoshiki Vázquez‐Baeza, Alison Vrbanac, Paul E. Wischmeyer, Elaine Wolfe, Qiyun Zhu, Rob Knight

Almmustuhtton 2018

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American Gut: an Open Platform for Citizen Science Microbiome Research Dahkki Daniel McDonald, Embriette R. Hyde, Justine W. Debelius, James T. Morton, Antonio González-Torres, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kościółek, Joshua Ladau, Jeff D. Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, José A. Navas-Molina, Tanya T. Nguyen, Shyamal D. Peddada, Pavel A. Pevzner, Katherine S. Pollard, Ali Rahnavard, Adam Robbins‐Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke Thompson, Anupriya Tripathi, Yoshiki Vázquez‐Baeza, Alison Vrbanac, Paul E. Wischmeyer, Elaine Wolfe, Qiyun Zhu, Rob Knight, Allison E. Mann, Amnon Amir, Angel Frazier, Cameron Martino, Carlito B. Lebrilla, Catherine Lozupone, Cecil M. Lewis, Charles L. Raison, Chi Zhang, Christian L. Lauber, Christina Warinner, Christopher A. Lowry, Chris Callewaert, Cinnamon S. Bloss, Dana Willner, Daniela Domingos Galzerani, David J. Gonzalez, David A. Mills, Deepak Chopra, Dirk Gevers, Donna Berg-Lyons, Dorothy D. Sears, Doug Wendel, Elijah Lovelace, Emily C. Pierce, Emily TerAvest, Evan Bolyen, Frederic D. Bushman, Gary D. Wu, George M. Church, Gordon Saxe, Hanna D. Holscher, Ivo Ugrina, J German, J. Gregory Caporaso, Jacob M. Wozniak, Jacqueline Kerr, Jacques Ravel, James D. Lewis, Jan S. Suchodolski, Janet Jansson, Jarrad Hampton‐Marcell

Almmustuhtton 2018

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