Ohcanbohtosat - Ardlie, Kristin

Data Resources for Human Functional Genomics Dahkki Ardlie, Kristin G., Guigó, Roderic

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Testing for Population Subdivision and Association in Four Case-Control Studies Dahkki Ardlie, Kristin G., Lunetta, Kathryn L., Seielstad, Mark

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The Discovery of Single-Nucleotide Polymorphisms—and Inferences about Human Demographic History Dahkki Wakeley, John, Nielsen, Rasmus, Liu-Cordero, Shau Neen, Ardlie, Kristin

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RNA-SeQC 2: efficient RNA-seq quality control and quantification for large cohorts Dahkki Graubert, Aaron, Aguet, François, Ravi, Arvind, Ardlie, Kristin G, Getz, Gad

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A vast resource of allelic expression data spanning human tissues Dahkki Castel, Stephane E., Aguet, François, Mohammadi, Pejman, Ardlie, Kristin G., Lappalainen, Tuuli

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A scalable unified framework of total and allele-specific counts for cis-QTL, fine-mapping, and prediction Dahkki Liang, Yanyu, Aguet, François, Barbeira, Alvaro N., Ardlie, Kristin, Im, Hae Kyung

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Lower-Than-Expected Linkage Disequilibrium between Tightly Linked Markers in Humans Suggests a Role for Gene Conversion Dahkki Ardlie, Kristin, Liu-Cordero, Shau Neen, Eberle, Michael A., Daly, Mark, Barrett, Jeff, Winchester, Ellen, Lander, Eric S., Kruglyak, Leonid

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Scaling computational genomics to millions of individuals with GPUs Dahkki Taylor-Weiner, Amaro, Aguet, François, Haradhvala, Nicholas J., Gosai, Sager, Anand, Shankara, Kim, Jaegil, Ardlie, Kristin, Van Allen, Eliezer M., Getz, Gad

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Transcription factor regulation of eQTL activity across individuals and tissues Dahkki Flynn, Elise D., Tsu, Athena L., Kasela, Silva, Kim-Hellmuth, Sarah, Aguet, Francois, Ardlie, Kristin G., Bussemaker, Harmen J., Mohammadi, Pejman, Lappalainen, Tuuli

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A High-Density Admixture Scan in 1,670 African Americans with Hypertension Dahkki Deo, Rahul C, Patterson, Nick, Tandon, Arti, McDonald, Gavin J, Haiman, Christopher A, Ardlie, Kristin, Henderson, Brian E, Henderson, Sean O, Reich, David

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AZFc Deletions and Spermatogenic Failure: A Population-Based Survey of 20,000 Y Chromosomes Dahkki Rozen, Steven G., Marszalek, Janet D., Irenze, Kathryn, Skaletsky, Helen, Brown, Laura G., Oates, Robert D., Silber, Sherman J., Ardlie, Kristin, Page, David C.

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Fine‐mapping and QTL tissue‐sharing information improves the reliability of causal gene identification Dahkki Barbeira, Alvaro N., Melia, Owen J., Liang, Yanyu, Bonazzola, Rodrigo, Wang, Gao, Wheeler, Heather E., Aguet, François, Ardlie, Kristin G., Wen, Xiaoquan, Im, Hae K.

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sn-spMF: matrix factorization informs tissue-specific genetic regulation of gene expression Dahkki He, Yuan, Chhetri, Surya B., Arvanitis, Marios, Srinivasan, Kaushik, Aguet, François, Ardlie, Kristin G., Barbeira, Alvaro N., Bonazzola, Rodrigo, Im, Hae Kyung, Brown, Christopher D., Battle, Alexis

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Haplotype and functional analysis of four flavin-containing monooxygenase isoform 2 (FMO2) polymorphisms in Hispanics Dahkki Krueger, Sharon K., Siddens, Lisbeth K., Henderson, Marilyn C., Andreasen, Eric A., Tanguay, Robert L., Pereira, Clifford B., Cabacungan, Erwin T., Hines, Ronald N., Ardlie, Kristin G., Williams, David E.

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Resources Required for Implementation of SARS‐CoV‐2 Screening in Massachusetts K‐12 Public Schools in Winter/Spring 2021 Dahkki Lee, Stephanie S., Weitz, Michelle, Ardlie, Kristin, Bantham, Amy, Schuckel, Michele Fronk, Goehringer, Katey, Hogue, Caitlin, Hosking, Rosy, Mortimer, Kathleen, Saadat, Alham, Seaman‐Chandler, Jill, Linas, Benjamin P., Ciaranello, Andrea

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Comprehensive Association Testing of Common Mitochondrial DNA Variation in Metabolic Disease Dahkki Saxena, Richa, de Bakker, Paul I. W., Singer, Karyn, Mootha, Vamsi, Burtt, Noël, Hirschhorn, Joel N., Gaudet, Daniel, Isomaa, Bo, Daly, Mark J., Groop, Leif, Ardlie, Kristin G., Altshuler, David

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Leveraging supervised learning for functionally informed fine-mapping of cis-eQTLs identifies an additional 20,913 putative causal eQTLs Dahkki Wang, Qingbo S., Kelley, David R., Ulirsch, Jacob, Kanai, Masahiro, Sadhuka, Shuvom, Cui, Ran, Albors, Carlos, Cheng, Nathan, Okada, Yukinori, Aguet, Francois, Ardlie, Kristin G., MacArthur, Daniel G., Finucane, Hilary K.

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Benchmarking association analyses of continuous exposures with RNA-seq in observational studies Dahkki Sofer, Tamar, Kurniansyah, Nuzulul, Aguet, François, Ardlie, Kristin, Durda, Peter, Nickerson, Deborah A, Smith, Joshua D, Liu, Yongmei, Gharib, Sina A, Redline, Susan, Rich, Stephen S, Rotter, Jerome I, Taylor, Kent D

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Massively-parallel single nucleus RNA-seq with DroNc-seq Dahkki Habib, Naomi, Avraham-Davidi, Inbal, Basu, Anindita, Burks, Tyler, Shekhar, Karthik, Hofree, Matan, Choudhury, Sourav R., Aguet, François, Gelfand, Ellen, Ardlie, Kristin, Weitz, David A, Rozenblatt-Rosen, Orit, Zhang, Feng, Regev, Aviv

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Genetic Basis of Autoantibody Positive and Negative Rheumatoid Arthritis Risk in a Multi-ethnic Cohort Derived from Electronic Health Records Dahkki Kurreeman, Fina, Liao, Katherine, Chibnik, Lori, Hickey, Brendan, Stahl, Eli, Gainer, Vivian, Li, Gang, Bry, Lynn, Mahan, Scott, Ardlie, Kristin, Thomson, Brian, Szolovits, Peter, Churchill, Susanne, Murphy, Shawn N., Cai, Tianxi, Raychaudhuri, Soumya, Kohane, Isaac, Karlson, Elizabeth, Plenge, Robert M.

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