Canlyniadau Chwilio - Anshul Kundaje

Mireinio'r Canlyniadau
  1. 1
    Reverse-complement parameter sharing improves deep learning models for genomics

    Reverse-complement parameter sharing improves deep learning models for genomics gan Avanti Shrikumar, Peyton Greenside, Anshul Kundaje

    Cyhoeddwyd 2017
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    Pré-impressão
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  2. 2
    GkmExplain: fast and accurate interpretation of nonlinear gapped k-mer SVMs

    GkmExplain: fast and accurate interpretation of nonlinear gapped k-mer SVMs gan Avanti Shrikumar, Eva Prakash, Anshul Kundaje

    Cyhoeddwyd 2019
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    Artigo
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  3. 3
    Characterization of the direct targets of<scp>FOXO</scp>transcription factors throughout evolution

    Characterization of the direct targets of<scp>FOXO</scp>transcription factors throughout evolution gan Ashley E. Webb, Anshul Kundaje, Anne Brunet

    Cyhoeddwyd 2016
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    Artigo
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  4. 4
    Denoising genome-wide histone ChIP-seq with convolutional neural networks

    Denoising genome-wide histone ChIP-seq with convolutional neural networks gan Pang Wei Koh, Emma Pierson, Anshul Kundaje

    Cyhoeddwyd 2017
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    Artigo
    Ychwanegu at ffefrynnau
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  5. 5
    The ENCODE Blacklist: Identification of Problematic Regions of the Genome

    The ENCODE Blacklist: Identification of Problematic Regions of the Genome gan Haley M. Amemiya, Anshul Kundaje, Alan P. Boyle

    Cyhoeddwyd 2019
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    Artigo
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  6. 6
    Umap and Bismap: quantifying genome and methylome mappability

    Umap and Bismap: quantifying genome and methylome mappability gan Mehran Karimzadeh, Carl Ernst, Anshul Kundaje, Michael M. Hoffman

    Cyhoeddwyd 2018
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    Artigo
    Ychwanegu at ffefrynnau
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  7. 7
    Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts

    Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts gan Surag Nair, Daniel Sunwook Kim, Jacob Perricone, Anshul Kundaje

    Cyhoeddwyd 2019
    Cael y testun llawn Cael y testun llawn
    Artigo
    Ychwanegu at ffefrynnau
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  8. 8
    MTSplice predicts effects of genetic variants on tissue-specific splicing

    MTSplice predicts effects of genetic variants on tissue-specific splicing gan Jun Cheng, Muhammed Hasan Çelik, Anshul Kundaje, Julien Gagneur

    Cyhoeddwyd 2021
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    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:
  9. 9
    Deciphering the impact of genetic variation on human polyadenylation using APARENT2

    Deciphering the impact of genetic variation on human polyadenylation using APARENT2 gan Johannes Linder, Samantha E. Koplik, Anshul Kundaje, Georg Seelig

    Cyhoeddwyd 2022
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    Artigo
    Ychwanegu at ffefrynnau
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  10. 10
    Large-Scale Quality Analysis of Published ChIP-seq Data

    Large-Scale Quality Analysis of Published ChIP-seq Data gan Georgi K. Marinov, Anshul Kundaje, Peter J. Park, B Wold

    Cyhoeddwyd 2013
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    Artigo
    Ychwanegu at ffefrynnau
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  11. 11
    Predicting genetic regulatory response using classification

    Predicting genetic regulatory response using classification gan Manuel Middendorf, Anshul Kundaje, Chris Wiggins, Yoav Freund, Christina Leslie

    Cyhoeddwyd 2004
    Cael y testun llawn
    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:
  12. 12
    Discovering epistatic feature interactions from neural network models of regulatory DNA sequences

    Discovering epistatic feature interactions from neural network models of regulatory DNA sequences gan Peyton Greenside, Tyler C. Shimko, Polly M. Fordyce, Anshul Kundaje

    Cyhoeddwyd 2018
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    Artigo
    Ychwanegu at ffefrynnau
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  13. 13
    Initiation of mtDNA transcription is followed by pausing, and diverges across human cell types and during evolution

    Initiation of mtDNA transcription is followed by pausing, and diverges across human cell types and during evolution gan Amit Blumberg, Edward J. Rice, Anshul Kundaje, Charles G. Danko, Dan Mishmar

    Cyhoeddwyd 2017
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    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:
  14. 14
    Linking disease associations with regulatory information in the human genome

    Linking disease associations with regulatory information in the human genome gan Marc A. Schaub, Alan P. Boyle, Anshul Kundaje, Serafim Batzoglou, M Snyder

    Cyhoeddwyd 2012
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    Artigo
    Ychwanegu at ffefrynnau
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  15. 15
    Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

    Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays gan Rajiv Movva, Peyton Greenside, Georgi K. Marinov, Surag Nair, Avanti Shrikumar, Anshul Kundaje

    Cyhoeddwyd 2019
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    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:
  16. 16
    Transcription-dependent domain-scale three-dimensional genome organization in the dinoflagellate Breviolum minutum

    Transcription-dependent domain-scale three-dimensional genome organization in the dinoflagellate Breviolum minutum gan Georgi K. Marinov, Alexandro E. Trevino, T. Xiang, Anshul Kundaje, Arthur Grossman, William J. Greenleaf

    Cyhoeddwyd 2021
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    Artigo
    Ychwanegu at ffefrynnau
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  17. 17
    Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease

    Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease gan Elizabeta Gjoneska, Andreas Pfenning, Hansruedi Mathys, Gerald Quon, Anshul Kundaje, Li-Huei Tsai, Manolis Kellis

    Cyhoeddwyd 2015
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    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:
  18. 18
    Domain-adaptive neural networks improve cross-species prediction of transcription factor binding

    Domain-adaptive neural networks improve cross-species prediction of transcription factor binding gan Kelly Cochran, Divyanshi Srivastava, Avanti Shrikumar, Akshay Balsubramani, Ross C. Hardison, Anshul Kundaje, Shaun Mahony

    Cyhoeddwyd 2022
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    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:
  19. 19
    Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage

    Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage gan Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K. Pritchard, Joanna Wysocka

    Cyhoeddwyd 2025
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    Artigo
    Ychwanegu at ffefrynnau
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  20. 20
    Chromatin accessibility dynamics reveal novel functional enhancers in <i>C. elegans</i>

    Chromatin accessibility dynamics reveal novel functional enhancers in <i>C. elegans</i> gan Aaron C. Daugherty, Robin W. Yeo, Jason D. Buenrostro, William J. Greenleaf, Anshul Kundaje, Anne Brunet

    Cyhoeddwyd 2017
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    Artigo
    Ychwanegu at ffefrynnau
    Wedi'i Gadw mewn:

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