Resultats de la cerca - Anna E. Sheppard

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  1. 1
    Instability of Plastid DNA in the Nuclear Genome

    Instability of Plastid DNA in the Nuclear Genome per Anna E. Sheppard, Jeremy N. Timmis

    Publicat 2009
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  2. 2
    Plassembler: an automated bacterial plasmid assembly tool

    Plassembler: an automated bacterial plasmid assembly tool per George Bouras, Anna E. Sheppard, Vijini Mallawaarachchi, Sarah Vreugde

    Publicat 2023
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  3. 3
    Complete Genome Sequence of Bacillus thuringiensis Strain 407 Cry-

    Complete Genome Sequence of Bacillus thuringiensis Strain 407 Cry- per Anna E. Sheppard, Anja Poehlein, Philip Rosenstiel, Heiko Liesegang, Hinrich Schulenburg

    Publicat 2013
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  4. 4
    TETyper: a bioinformatic pipeline for classifying variation and genetic contexts of transposable elements from short-read whole-genome sequencing data

    TETyper: a bioinformatic pipeline for classifying variation and genetic contexts of transposable elements from short-read whole-genome sequencing data per Anna E. Sheppard, Nicole Stoesser, Ian German-Mesner, Kasi Vegesana, Timothy M. Walker, Derrick W. Crook, Amy J. Mathers

    Publicat 2018
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  5. 5
    Transfer of Plastid DNA to the Nucleus Is Elevated during Male Gametogenesis in Tobacco

    Transfer of Plastid DNA to the Nucleus Is Elevated during Male Gametogenesis in Tobacco per Anna E. Sheppard, Michael Ayliffe, Laura Blatch, Anil Day, Sven K Delaney, Norfarhana Khairul-Fahmy, Yuan Li, Panagiotis Madesis, A. Pryor, Jeremy N. Timmis

    Publicat 2008
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  6. 6
    Don't overlook the little guy: An evaluation of the frequency of small plasmids co-conjugating with larger carbapenemase gene containing plasmids

    Don't overlook the little guy: An evaluation of the frequency of small plasmids co-conjugating with larger carbapenemase gene containing plasmids per Katie E. Barry, Alexander M. Wailan, Anna E. Sheppard, Derrick W. Crook, Kasi Vegesana, Nicole Stoesser, Hardik I. Parikh, Robert Sebra, Amy J. Mathers

    Publicat 2019
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  7. 7
    Hybracter: enabling scalable, automated, complete and accurate bacterial genome assemblies

    Hybracter: enabling scalable, automated, complete and accurate bacterial genome assemblies per George Bouras, Ghais Houtak, Ryan R. Wick, Vijini Mallawaarachchi, Michael J. Roach, Bhavya Papudeshi, Louise M. Judd, Anna E. Sheppard, Robert A. Edwards, Sarah Vreugde

    Publicat 2024
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  8. 8
    Horizontal Transfer of Carbapenemase-Encoding Plasmids and Comparison with Hospital Epidemiology Data

    Horizontal Transfer of Carbapenemase-Encoding Plasmids and Comparison with Hospital Epidemiology Data per C. A. Hardiman, Rebecca A. Weingarten, Sean Conlan, Pavel P. Khil, John P. Dekker, Amy J. Mathers, Anna E. Sheppard, Julia A. Segre, Karen M. Frank

    Publicat 2016
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  9. 9
    Plasmid Classification in an Era of Whole-Genome Sequencing: Application in Studies of Antibiotic Resistance Epidemiology

    Plasmid Classification in an Era of Whole-Genome Sequencing: Application in Studies of Antibiotic Resistance Epidemiology per Alex Orlek, Nicole Stoesser, Muna F. Anjum, Michel Doumith, Matthew J. Ellington, Tim Peto, Derrick W. Crook, Neil Woodford, A. Sarah Walker, Hang Phan, Anna E. Sheppard

    Publicat 2017
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  10. 10
    A curated dataset of complete Enterobacteriaceae plasmids compiled from the NCBI nucleotide database

    A curated dataset of complete Enterobacteriaceae plasmids compiled from the NCBI nucleotide database per Alex Orlek, Hang Phan, Anna E. Sheppard, Michel Doumith, Matthew J. Ellington, Tim Peto, Derrick W. Crook, Timothy M. Walker, Neil Woodford, Muna F. Anjum, Nicole Stoesser

    Publicat 2017
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  11. 11
    Dynamics of MDR <i>Enterobacter cloacae</i> outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing

    Dynamics of MDR <i>Enterobacter cloacae</i> outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing per Nicole Stoesser, Anna E. Sheppard, Mila Shakya, B. R. Sthapit, Stephen Thorson, Adam Giess, Dominic F. Kelly, Andrew J. Pollard, Tim Peto, A. Sarah Walker, Derrick W. Crook

    Publicat 2015
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  12. 12
    Enhanced Klebsiella pneumoniae Carbapenemase Expression from a Novel Tn <i>4401</i> Deletion

    Enhanced Klebsiella pneumoniae Carbapenemase Expression from a Novel Tn <i>4401</i> Deletion per Anita Cheruvanky, Nicole Stoesser, Anna E. Sheppard, Derrick W. Crook, Paul S. Hoffman, Erin Weddle, Joanne Carroll, Costi D. Sifri, Weidong Chai, Kerrie Barry, Girija Ramakrishnan, Amy J. Mathers

    Publicat 2017
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  13. 13
    <i>Klebsiella quasipneumoniae</i> Provides a Window into Carbapenemase Gene Transfer, Plasmid Rearrangements, and Patient Interactions with the Hospital Environment

    <i>Klebsiella quasipneumoniae</i> Provides a Window into Carbapenemase Gene Transfer, Plasmid Rearrangements, and Patient Interactions with the Hospital Environment per Amy J. Mathers, Derrick W. Crook, Alison Vaughan, Katie E. Barry, Kasi Vegesana, Nicole Stoesser, Hardik I. Parikh, Robert Sebra, Shireen Kotay, A. Sarah Walker, Anna E. Sheppard

    Publicat 2019
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  14. 14
    Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches

    Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches per Sophie George, Louise Pankhurst, Alasdair T. M. Hubbard, Antonia Votintseva, Nicole Stoesser, Anna E. Sheppard, Amy J. Mathers, Rachel Norris, Indre Navickaite, Chloe Eaton, Zamin Iqbal, Derrick W. Crook, Hang Phan

    Publicat 2017
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  15. 15
    Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing

    Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing per Amy J. Mathers, Nicole Stoesser, Anna E. Sheppard, Louise Pankhurst, Adam Giess, Anthony J. Yeh, Xavier Didelot, Stephen Turner, Robert Sebra, Andrew Kasarskis, Tim Peto, Derrick W. Crook, Costi D. Sifri

    Publicat 2015
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  16. 16
    The Stealthy Superbug: the Role of Asymptomatic Enteric Carriage in Maintaining a Long-Term Hospital Outbreak of ST228 Methicillin-Resistant Staphylococcus aureus

    The Stealthy Superbug: the Role of Asymptomatic Enteric Carriage in Maintaining a Long-Term Hospital Outbreak of ST228 Methicillin-Resistant Staphylococcus aureus per Laurence Senn, Olivier Clerc, Giorgio Zanetti, Patrick Basset, Guy Prod’hom, N Claire Gordon, Anna E. Sheppard, Derrick W. Crook, Richard W. James, Harry A. Thorpe, Edward J. Feil, Dominique Blanc

    Publicat 2016
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  17. 17
    The Role of <i>fosA</i> in Challenges with Fosfomycin Susceptibility Testing of Multispecies Klebsiella pneumoniae Carbapenemase-Producing Clinical Isolates

    The Role of <i>fosA</i> in Challenges with Fosfomycin Susceptibility Testing of Multispecies Klebsiella pneumoniae Carbapenemase-Producing Clinical Isolates per Zachary S. Elliott, Katie E. Barry, Heather L. Cox, Nicole Stoesser, Joanne Carroll, Kasi Vegesana, Shireen Kotay, Anna E. Sheppard, Alexander M. Wailan, Derrick W. Crook, Hardik I. Parikh, Amy J. Mathers

    Publicat 2019
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  18. 18
    Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses

    Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses per Nicole Stoesser, Anna E. Sheppard, Catrin E. Moore, Tanya Golubchik, Christopher M. Parry, P. Nget, M. Saroeun, Nicholas Day, Adam Giess, James R. Johnson, Tim Peto, Derrick W. Crook, A. Sarah Walker

    Publicat 2015
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  19. 19
    Chromosomal Integration of the Klebsiella pneumoniae Carbapenemase Gene, <i>bla</i> <sub>KPC</sub> , in Klebsiella Species Is Elusive but Not Rare

    Chromosomal Integration of the Klebsiella pneumoniae Carbapenemase Gene, <i>bla</i> <sub>KPC</sub> , in Klebsiella Species Is Elusive but Not Rare per Amy J. Mathers, Nicole Stoesser, Weidong Chai, Joanne Carroll, Katie E. Barry, Anita Cherunvanky, Robert Sebra, Andrew Kasarskis, Tim Peto, A. Sarah Walker, Costi D. Sifri, Derrick W. Crook, Anna E. Sheppard

    Publicat 2016
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  20. 20
    Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli

    Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli per Nicole Stoesser, Anna E. Sheppard, Gisele Peirano, L. W. Anson, Louise Pankhurst, Robert Sebra, Hang Phan, Andrew Kasarskis, Amy J. Mathers, Tim Peto, Patricia A. Bradford, Mary Motyl, Timothy M. Walker, Derrick W. Crook, Johann Pitout

    Publicat 2017
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