Search Results - Andrew Carroll

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  1. 1
    A New Nonpenetrating Ballistic Injury

    A New Nonpenetrating Ballistic Injury by Andrew Carroll, Carl A. Soderstrom

    Published 1978
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  2. 2
    Ca<sup>2+</sup>, Annexins, and GTP Modulate Exocytosis from Maize Root Cap Protoplasts

    Ca<sup>2+</sup>, Annexins, and GTP Modulate Exocytosis from Maize Root Cap Protoplasts by Andrew Carroll, Christelle Moyen, Pim Van Kesteren, Fiona Tooke, N. H. Battey, Colin Brownlee

    Published 1998
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  3. 3
    Accurate, scalable cohort variant calls using DeepVariant and GLnexus

    Accurate, scalable cohort variant calls using DeepVariant and GLnexus by Taedong Yun, Helen Li, Pi-Chuan Chang, Michael Lin, Andrew Carroll, Cory Y. McLean

    Published 2020
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  4. 4
    DeepNull models non-linear covariate effects to improve phenotypic prediction and association power

    DeepNull models non-linear covariate effects to improve phenotypic prediction and association power by Zachary R. McCaw, Thomas Colthurst, Taedong Yun, Nicholas A. Furlotte, Andrew Carroll, Babak Alipanahi, Cory Y. McLean, Farhad Hormozdiari

    Published 2022
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  5. 5
    Parliament2: Accurate structural variant calling at scale

    Parliament2: Accurate structural variant calling at scale by Samantha Zarate, Andrew Carroll, Medhat Mahmoud, Olga Krasheninina, Goo Jun, William Salerno, Michael C. Schatz, Eric Boerwinkle, Richard A. Gibbs, Fritz J. Sedlazeck

    Published 2020
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  6. 6
    WGSA: an annotation pipeline for human genome sequencing studies

    WGSA: an annotation pipeline for human genome sequencing studies by Xiaoming Liu, Simon White, Bo Peng, Andrew D. Johnson, Jennifer A. Brody, Alexander Li, Zhuoyi Huang, Andrew Carroll, Peng Wei, Richard A. Gibbs, Robert J. Klein, Eric Boerwinkle

    Published 2015
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  7. 7
    Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads

    Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads by Kishwar Shafin, Trevor Pesout, Pi-Chuan Chang, Maria Nattestad, Alexey Kolesnikov, Sidharth Goel, Gunjan Baid, Mikhail Kolmogorov, Jordan M. Eizenga, Karen H. Miga, P. Carnevali, Miten Jain, Andrew Carroll, Benedict Paten

    Published 2021
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  8. 8
    Accurate human genome analysis with Element Avidity sequencing

    Accurate human genome analysis with Element Avidity sequencing by Andrew Carroll, Alexey Kolesnikov, Daniel E. Cook, Lucas Brambrink, Kelly Wiseman, Sophie Billings, Semyon Kruglyak, Bryan R. Lajoie, June Zhao, Shawn Levy, Cory Y. McLean, Kishwar Shafin, Maria Nattestad, Pi-Chuan Chang

    Published 2023
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  9. 9
    Local read haplotagging enables accurate long-read small variant calling

    Local read haplotagging enables accurate long-read small variant calling by Alexey Kolesnikov, Daniel E. Cook, Maria Nattestad, Lucas Brambrink, Brandy McNulty, John E. Gorzynski, Sneha D. Goenka, Euan A. Ashley, Miten Jain, Karen H. Miga, Benedict Paten, Pi-Chuan Chang, Andrew Carroll, Kishwar Shafin

    Published 2024
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  10. 10
    Label-free in situ imaging of lignification in the cell wall of low lignin transgenic Populus trichocarpa

    Label-free in situ imaging of lignification in the cell wall of low lignin transgenic Populus trichocarpa by Martin Schmidt, Adam Schwartzberg, Pradeep N. Perera, Alexander Weber‐Bargioni, Andrew Carroll, Purnamrita Sarkar, Elena Bosneaga, Jeffrey J. Urban, Jina Song, Mikhail Balakshin, Ewellyn A. Capanema, Manfred Auer, Paul D. Adams, Vincent L. Chiang, P. James Schuck

    Published 2009
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  11. 11
    Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline

    Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline by Jeffrey G. Reid, Andrew Carroll, Narayanan Veeraraghavan, Mahmoud Dahdouli, Andreas Sundquist, Adam C. English, Matthew N. Bainbridge, Simon White, William Salerno, Christian Buhay, Fuli Yu, Donna M. Muzny, Richard Daly, Geoff M. Duyk, Richard A. Gibbs, Eric Boerwinkle

    Published 2014
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  12. 12
    Large-scale machine-learning-based phenotyping significantly improves genomic discovery for optic nerve head morphology

    Large-scale machine-learning-based phenotyping significantly improves genomic discovery for optic nerve head morphology by Babak Alipanahi, Farhad Hormozdiari, Babak Behsaz, Justin Cosentino, Zachary R. McCaw, Emanuel Schorsch, D. Sculley, Elizabeth H. Dorfman, Paul J. Foster, Lily H. Peng, Sonia Phene, Naama Hammel, Andrew Carroll, Anthony P. Khawaja, Cory Y. McLean

    Published 2021
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  13. 13
    Unsupervised representation learning on high-dimensional clinical data improves genomic discovery and prediction

    Unsupervised representation learning on high-dimensional clinical data improves genomic discovery and prediction by Taedong Yun, Justin Cosentino, Babak Behsaz, Zachary R. McCaw, Davin Hill, Robert Luben, Dongbing Lai, John Bates, Howard H. Yang, Tae‐Hwi Schwantes‐An, Yuchen Zhou, Anthony P. Khawaja, Andrew Carroll, Brian D. Hobbs, Michael H. Cho, Cory Y. McLean, Farhad Hormozdiari

    Published 2024
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  14. 14
    Pangenomics enables genotyping of known structural variants in 5202 diverse genomes

    Pangenomics enables genotyping of known structural variants in 5202 diverse genomes by Jouni Sirén, Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello, Jonas A. Sibbesen, Glenn Hickey, Pi-Chuan Chang, Andrew Carroll, Namrata Gupta, Stacey Gabriel, Thomas W. Blackwell, Aakrosh Ratan, Kent D. Taylor, Stephen S. Rich, Jerome I. Rotter, David Haussler, Erik Garrison, Benedict Paten

    Published 2021
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  15. 15
    Chromosome-scale, haplotype-resolved assembly of human genomes

    Chromosome-scale, haplotype-resolved assembly of human genomes by Shilpa Garg, Arkarachai Fungtammasan, Andrew Carroll, Mike Chou, Anthony D. Schmitt, Xiang Zhou, Stephen Mac, Paul Peluso, Emily Hatas, Jay Ghurye, Jared Maguire, Medhat Mahmoud, Haoyu Cheng, David N. Heller, Justin M. Zook, Tobias Moemke, Tobias Marschall, Fritz J. Sedlazeck, John Aach, Chen-Shan Chin, George M. Church, Heng Li

    Published 2020
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  16. 16
    A diploid assembly-based benchmark for variants in the major histocompatibility complex

    A diploid assembly-based benchmark for variants in the major histocompatibility complex by Chen-Shan Chin, Justin Wagner, Qiandong Zeng, Erik Garrison, Shilpa Garg, Arkarachai Fungtammasan, Mikko Rautiainen, Sergey Aganezov, Melanie Kirsche, Samantha Zarate, Michael C. Schatz, Chunlin Xiao, William J. Rowell, Charles Markello, Jesse Farek, Fritz J. Sedlazeck, Vikas Bansal, Byunggil Yoo, Neil Miller, Xin Zhou, Andrew Carroll, Álvaro Martínez Barrio, Marc Salit, Tobias Marschall, Alexander Dilthey, Justin M. Zook

    Published 2020
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  17. 17
    Assessing structural variation in a personal genome—towards a human reference diploid genome

    Assessing structural variation in a personal genome—towards a human reference diploid genome by Adam C. English, William Salerno, Oliver Hampton, Claudia Gonzaga‐Jauregui, Shruthi Ambreth, Deborah Ritter, Christine R. Beck, Caleb Davis, Mahmoud Dahdouli, Singer Ma, Andrew Carroll, Narayanan Veeraraghavan, Jeremy Bruestle, Becky Drees, Alex Hastie, Ernest T. Lam, Simon White, Pamela Mishra, Min Wang, Yi Han, Feng Zhang, Paweł Stankiewicz, David A. Wheeler, Jeffrey G. Reid, Donna M. Muzny, Jeffrey Rogers, Aniko Sabo, Kim C. Worley, James R. Lupski, Eric Boerwinkle, Richard A. Gibbs

    Published 2015
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  18. 18
    Highly-accurate long-read sequencing improves variant detection and assembly of a human genome

    Highly-accurate long-read sequencing improves variant detection and assembly of a human genome by Aaron M. Wenger, Paul Peluso, William J. Rowell, Pi-Chuan Chang, Richard Hall, Gregory T. Concepcion, Jana Ebler, Arkarachai Fungtammasan, Alexey Kolesnikov, Nathan D. Olson, Armin Töpfer, Michael Alonge, Medhat Mahmoud, Y. Qian, Chen-Shan Chin, Adam M. Phillippy, Michael C. Schatz, Gene Myers, Mark A. DePristo, Jue Ruan, Tobias Marschall, Fritz J. Sedlazeck, Justin M. Zook, Heng Li, Sergey Koren, Andrew Carroll, David R. Rank, Michael W. Hunkapiller

    Published 2019
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  19. 19
    Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

    Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome by Aaron M. Wenger, Paul Peluso, William J. Rowell, Pi-Chuan Chang, Richard Hall, Gregory T. Concepcion, Jana Ebler, Arkarachai Fungtammasan, Alexey Kolesnikov, Nathan D. Olson, Armin Töpfer, Michael Alonge, Medhat Mahmoud, Yufeng Qian, Chen-Shan Chin, Adam M. Phillippy, Michael C. Schatz, Gene Myers, Mark A. DePristo, Jue Ruan, Tobias Marschall, Fritz J. Sedlazeck, Justin M. Zook, Heng Li, Sergey Koren, Andrew Carroll, David R. Rank, Michael W. Hunkapiller

    Published 2019
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  20. 20
    Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing

    Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing by Sneha D. Goenka, John E. Gorzynski, Kishwar Shafin, Dianna G. Fisk, Trevor Pesout, Tanner Jensen, Jean Monlong, Pi-Chuan Chang, Gunjan Baid, Jonathan A. Bernstein, Jeffrey W. Christle, Karen Dalton, Daniel R. Garalde, Megan E. Grove, Joseph Guillory, Alexey Kolesnikov, Maria Nattestad, Maura Ruzhnikov, Mehrzad Samadi, Ankit Sethia, Elizabeth Spiteri, Christopher J. Wright, Katherine Xiong, Tong Zhu, Miten Jain, Fritz J. Sedlazeck, Andrew Carroll, Benedict Paten, Euan A. Ashley

    Published 2022
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