Search Results - Andre Sim

  • Showing 1 - 6 results of 6
Refine Results
  1. 1
    Context-aware transcript quantification from long-read RNA-seq data with Bambu

    Context-aware transcript quantification from long-read RNA-seq data with Bambu by Ying Chen, Andre Sim, Yuk Kei Wan, Keith Yeo, Joseph Lee, Min Hao Ling, Michael I. Love, Jonathan Göke

    Published 2023
    Get full text
    Artigo
    Save to List
    Saved in:
  2. 2
    Genome‐wide gene expression dynamics of the fungal pathogen <i><scp>D</scp>othistroma septosporum</i> throughout its infection cycle of the gymnosperm host <i><scp>P</scp>inus radiata</i>

    Genome‐wide gene expression dynamics of the fungal pathogen <i><scp>D</scp>othistroma septosporum</i> throughout its infection cycle of the gymnosperm host <i><scp>P</scp>inus radi... by Rosie E. Bradshaw, Yanan Guo, Andre Sim, M. Shahjahan Kabir, Pranav Chettri, I. Kutay Ozturk, Lukas Hunziker, Rebecca J. Ganley, Murray P. Cox

    Published 2015
    Get full text
    Artigo
    Save to List
    Saved in:
  3. 3
    A systematic benchmark of Nanopore long read RNA sequencing for transcript level analysis in human cell lines

    A systematic benchmark of Nanopore long read RNA sequencing for transcript level analysis in human cell lines by Ying Chen, N. Davidson, Yuk Kei Wan, Harshil Patel, Fei Yao, Hwee Meng Low, Christopher Hendra, Laura Watten, Andre Sim, Chelsea Sawyer, Viktoriia Iakovleva, Puay Leng Lee, Lixia Xin, Hui En Vanessa Ng, Jia Min Loo, Xuewen Ong, Hui Qi Amanda Ng, Jiaxu Wang, Wei Qian Casslynn Koh, Suk Yeah Polly Poon, Dominik Stanojević, Hoang-Dai Tran, Kok Hao Edwin Lim, Shen Yon Toh, Philip Ewels, Huck‐Hui Ng, N. Gopalakrishna Iyer, Alexandre H. Thiéry, Wee Joo Chng, Leilei Chen, Ramanuj DasGupta, Mile Šikić, Yun-Shen Chan, Boon Ooi Patrick Tan, Yue Wan, Wai Leong Tam, Qiang Yu, Chiea Chuan Khor, Torsten Wüstefeld, Ploy N. Pratanwanich, Michael I. Love, W.S. Sho Goh, Sarah Ng, Alicia Oshlack, Jonathan Göke

    Published 2021
    Get full text
    Pré-impressão
    Save to List
    Saved in:
  4. 4
    A systematic benchmark of Nanopore long-read RNA sequencing for transcript-level analysis in human cell lines

    A systematic benchmark of Nanopore long-read RNA sequencing for transcript-level analysis in human cell lines by Ying Chen, N. Davidson, Yuk Kei Wan, Fei Yao, Yan Su, Hasindu Gamaarachchi, Andre Sim, Harshil Patel, Hwee Meng Low, Christopher Hendra, Laura Wratten, Christopher Hakkaart, Chelsea Sawyer, Viktoriia Iakovleva, Puay Leng Lee, Lixia Xin, Vanessa Hui En Ng, Jia Min Loo, Xuewen Ong, Hui Qi Amanda Ng, Jiaxu Wang, Wei Qian Casslynn Koh, Suk Yeah Polly Poon, Dominik Stanojević, Hoang‐Dai Tran, Kok Hao Edwin Lim, Shen Yon Toh, Philip Ewels, Huck‐Hui Ng, N. Gopalakrishna Iyer, Alexandre H. Thiéry, Wee Joo Chng, Leilei Chen, Ramanuj DasGupta, Mile Šikić, Yun-Shen Chan, Patrick Tan, Yue Wan, Wai Leong Tam, Qiang Yu, Chiea Chuen Khor, Torsten Wüstefeld, Alexander Lezhava, Ploy N. Pratanwanich, Michael I. Love, W.S. Sho Goh, Sarah Ng, Alicia Oshlack, N. Gopalakrishna Iyer, Qiang Yu, Jonathan Göke

    Published 2025
    Get full text
    Artigo
    Save to List
    Saved in:
  5. 5
    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification by Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams, Jane Loveland, Maite De María, Matthew S. Adams, Gabriela Balderrama-Gutierrez, Amit K. Behera, José M. González, Toby Hunt, Julien Lagarde, Cindy Liang, Haoran Li, Marcus J. Meade, David A. Moraga Amador, Andrey D. Prjibelski, İnanç Birol, Hamed Bostan, Ashley Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R. M. Du, Colette Felton, Jonathan Göke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian‐Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella-Gutiérrez, Namrita Dhillon, Jose M. Fernandez-Gonzalez, Luis Ferrández-Peral, Natàlia García‐Reyero, Stefan Goetz, Carles Hernández-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Eric C. Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Smith, Marie‐Marthe Suner, Hazuki Takahashi, Ingrid Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Margaret E. Hunter, Hagen Tilgner, B Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria Sheynkman, A Mortazavi, Ana Conesa, Angela N. Brooks

    Published 2023
    Get full text Get full text
    Pré-impressão
    Save to List
    Saved in:
  6. 6
    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification by Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams, Jane Loveland, Maite De María, Matthew S. Adams, Gabriela Balderrama-Gutierrez, Amit K. Behera, José M. González, Toby Hunt, Julien Lagarde, Cindy Liang, Haoran Li, Marcus J. Meade, David A. Moraga Amador, Andrey D. Prjibelski, İnanç Birol, Hamed Bostan, Ashley M. Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R. M. Du, Colette Felton, Jonathan Göke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian‐Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella-Gutiérrez, Alyssa Cousineau, Namrita Dhillon, José M. Fernández, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernández-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C. Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Smith, Marie‐Marthe Suner, Hazuki Takahashi, Ingrid Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Margaret E. Hunter, René Maehr, Yin Shen, Hagen Tilgner, B Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria Sheynkman, A Mortazavi, Ana Conesa, Angela N. Brooks

    Published 2024
    Get full text Get full text
    Artigo
    Save to List
    Saved in:

Search Tools: