Rezultati pretrage autora

1

A Partition Function Approximation Using Elementary Symmetric Functions od Anandakrishnan, Ramu

Izdano 2012

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2

An N log N approximation based on the natural organization of biomolecules for speeding up the computation of long range interactions od Anandakrishnan, Ramu, Onufriev, Alexey V.

Izdano 2010

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3

Biophysical comparison of ATP-driven proton pumping mechanisms suggests a kinetic advantage for the rotary process depending on coupling ratio od Anandakrishnan, Ramu, Zuckerman, Daniel M.

Izdano 2017

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4

Functional bias in molecular evolution rate of Arabidopsis thaliana od Warren, Andrew S, Anandakrishnan, Ramu, Zhang, Liqing

Izdano 2010

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5

H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations od Anandakrishnan, Ramu, Aguilar, Boris, Onufriev, Alexey V.

Izdano 2012

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6

Building Water Models: A Different Approach od Izadi, Saeed, Anandakrishnan, Ramu, Onufriev, Alexey V.

Izdano 2014

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7

Implicit Solvent Model for Million-Atom Atomistic Simulations: Insights into the Organization of 30-nm Chromatin Fiber od Izadi, Saeed, Anandakrishnan, Ramu, Onufriev, Alexey V.

Izdano 2016

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8

Application of Machine Learning Method in Genomics and Proteomics od Lin, Hao, Chen, Wei, Anandakrishnan, Ramu, Plewczynski, Dariusz

Izdano 2015

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9

Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions od Anandakrishnan, Ramu, Baker, Charles, Izadi, Saeed, Onufriev, Alexey V.

Izdano 2013

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10

Crossing complexity of space-filling curves reveals entanglement of S-phase DNA od Kinney, Nick, Hickman, Molly, Anandakrishnan, Ramu, Garner, Harold R.

Izdano 2020

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11

Statistics and Physical Origins of pK and Ionization State Changes upon Protein-Ligand Binding od Aguilar, Boris, Anandakrishnan, Ramu, Ruscio, Jory Z., Onufriev, Alexey V.

Izdano 2010

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12

Speed of Conformational Change: Comparing Explicit and Implicit Solvent Molecular Dynamics Simulations od Anandakrishnan, Ramu, Drozdetski, Aleksander, Walker, Ross C., Onufriev, Alexey V.

Izdano 2015

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13

Biophysical comparison of ATP synthesis mechanisms shows a kinetic advantage for the rotary process od Anandakrishnan, Ramu, Zhang, Zining, Donovan-Maiye, Rory, Zuckerman, Daniel M.

Izdano 2016

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14

ZDHHC3 as a Risk and Mortality Marker for Breast Cancer in African American Women od Kinney, Nick, Varghese, Robin T, Anandakrishnan, Ramu, Garner, Harold R “Skip”

Izdano 2017

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15

Modulation of nucleosomal DNA accessibility via charge-altering post-translational modifications in histone core od Fenley, Andrew T., Anandakrishnan, Ramu, Kidane, Yared H., Onufriev, Alexey V.

Izdano 2018

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16

Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations od Anandakrishnan, Ramu, Varghese, Robin T., Kinney, Nicholas A., Garner, Harold R.

Izdano 2019

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17

Identifying multi-hit carcinogenic gene combinations: Scaling up a weighted set cover algorithm using compressed binary matrix representation on a GPU od Al Hajri, Qais, Dash, Sajal, Feng, Wu-chun, Garner, Harold R., Anandakrishnan, Ramu

Izdano 2020

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18

Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations od Dash, Sajal, Kinney, Nicholas A., Varghese, Robin T., Garner, Harold R., Feng, Wu-chun, Anandakrishnan, Ramu

Izdano 2019

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19

Author Correction: Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations od Dash, Sajal, Kinney, Nicholas A., Varghese, Robin T., Garner, Harold R., Feng, Wu-chun, Anandakrishnan, Ramu

Izdano 2019

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20

Accelerating Electrostatic Surface Potential Calculation with Multiscale Approximation on Graphics Processing Units od Anandakrishnan, Ramu, Scogland, Tom R. W., Fenley, Andrew T., Gordon, John C., Feng, Wu-chun, Onufriev, Alexey V.

Izdano 2010

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Rezultati pretrage - Anandakrishnan, Ramu

A Partition Function Approximation Using Elementary Symmetric Functions od Anandakrishnan, Ramu

An N log N approximation based on the natural organization of biomolecules for speeding up the computation of long range interactions od Anandakrishnan, Ramu, Onufriev, Alexey V.

Biophysical comparison of ATP-driven proton pumping mechanisms suggests a kinetic advantage for the rotary process depending on coupling ratio od Anandakrishnan, Ramu, Zuckerman, Daniel M.

Functional bias in molecular evolution rate of Arabidopsis thaliana od Warren, Andrew S, Anandakrishnan, Ramu, Zhang, Liqing

H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations od Anandakrishnan, Ramu, Aguilar, Boris, Onufriev, Alexey V.

Building Water Models: A Different Approach od Izadi, Saeed, Anandakrishnan, Ramu, Onufriev, Alexey V.

Implicit Solvent Model for Million-Atom Atomistic Simulations: Insights into the Organization of 30-nm Chromatin Fiber od Izadi, Saeed, Anandakrishnan, Ramu, Onufriev, Alexey V.

Application of Machine Learning Method in Genomics and Proteomics od Lin, Hao, Chen, Wei, Anandakrishnan, Ramu, Plewczynski, Dariusz

Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions od Anandakrishnan, Ramu, Baker, Charles, Izadi, Saeed, Onufriev, Alexey V.

Crossing complexity of space-filling curves reveals entanglement of S-phase DNA od Kinney, Nick, Hickman, Molly, Anandakrishnan, Ramu, Garner, Harold R.

Statistics and Physical Origins of pK and Ionization State Changes upon Protein-Ligand Binding od Aguilar, Boris, Anandakrishnan, Ramu, Ruscio, Jory Z., Onufriev, Alexey V.

Speed of Conformational Change: Comparing Explicit and Implicit Solvent Molecular Dynamics Simulations od Anandakrishnan, Ramu, Drozdetski, Aleksander, Walker, Ross C., Onufriev, Alexey V.

Biophysical comparison of ATP synthesis mechanisms shows a kinetic advantage for the rotary process od Anandakrishnan, Ramu, Zhang, Zining, Donovan-Maiye, Rory, Zuckerman, Daniel M.

ZDHHC3 as a Risk and Mortality Marker for Breast Cancer in African American Women od Kinney, Nick, Varghese, Robin T, Anandakrishnan, Ramu, Garner, Harold R “Skip”

Modulation of nucleosomal DNA accessibility via charge-altering post-translational modifications in histone core od Fenley, Andrew T., Anandakrishnan, Ramu, Kidane, Yared H., Onufriev, Alexey V.

Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations od Anandakrishnan, Ramu, Varghese, Robin T., Kinney, Nicholas A., Garner, Harold R.

Identifying multi-hit carcinogenic gene combinations: Scaling up a weighted set cover algorithm using compressed binary matrix representation on a GPU od Al Hajri, Qais, Dash, Sajal, Feng, Wu-chun, Garner, Harold R., Anandakrishnan, Ramu

Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations od Dash, Sajal, Kinney, Nicholas A., Varghese, Robin T., Garner, Harold R., Feng, Wu-chun, Anandakrishnan, Ramu

Author Correction: Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations od Dash, Sajal, Kinney, Nicholas A., Varghese, Robin T., Garner, Harold R., Feng, Wu-chun, Anandakrishnan, Ramu

Accelerating Electrostatic Surface Potential Calculation with Multiscale Approximation on Graphics Processing Units od Anandakrishnan, Ramu, Scogland, Tom R. W., Fenley, Andrew T., Gordon, John C., Feng, Wu-chun, Onufriev, Alexey V.

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