Torthaí cuardaigh - Anandakrishnan, Ramu

A Partition Function Approximation Using Elementary Symmetric Functions de réir Anandakrishnan, Ramu

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

An N log N approximation based on the natural organization of biomolecules for speeding up the computation of long range interactions de réir Anandakrishnan, Ramu, Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Biophysical comparison of ATP-driven proton pumping mechanisms suggests a kinetic advantage for the rotary process depending on coupling ratio de réir Anandakrishnan, Ramu, Zuckerman, Daniel M.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Functional bias in molecular evolution rate of Arabidopsis thaliana de réir Warren, Andrew S, Anandakrishnan, Ramu, Zhang, Liqing

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations de réir Anandakrishnan, Ramu, Aguilar, Boris, Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Building Water Models: A Different Approach de réir Izadi, Saeed, Anandakrishnan, Ramu, Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Implicit Solvent Model for Million-Atom Atomistic Simulations: Insights into the Organization of 30-nm Chromatin Fiber de réir Izadi, Saeed, Anandakrishnan, Ramu, Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Application of Machine Learning Method in Genomics and Proteomics de réir Lin, Hao, Chen, Wei, Anandakrishnan, Ramu, Plewczynski, Dariusz

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions de réir Anandakrishnan, Ramu, Baker, Charles, Izadi, Saeed, Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Crossing complexity of space-filling curves reveals entanglement of S-phase DNA de réir Kinney, Nick, Hickman, Molly, Anandakrishnan, Ramu, Garner, Harold R.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Statistics and Physical Origins of pK and Ionization State Changes upon Protein-Ligand Binding de réir Aguilar, Boris, Anandakrishnan, Ramu, Ruscio, Jory Z., Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Speed of Conformational Change: Comparing Explicit and Implicit Solvent Molecular Dynamics Simulations de réir Anandakrishnan, Ramu, Drozdetski, Aleksander, Walker, Ross C., Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Biophysical comparison of ATP synthesis mechanisms shows a kinetic advantage for the rotary process de réir Anandakrishnan, Ramu, Zhang, Zining, Donovan-Maiye, Rory, Zuckerman, Daniel M.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

ZDHHC3 as a Risk and Mortality Marker for Breast Cancer in African American Women de réir Kinney, Nick, Varghese, Robin T, Anandakrishnan, Ramu, Garner, Harold R “Skip”

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Modulation of nucleosomal DNA accessibility via charge-altering post-translational modifications in histone core de réir Fenley, Andrew T., Anandakrishnan, Ramu, Kidane, Yared H., Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations de réir Anandakrishnan, Ramu, Varghese, Robin T., Kinney, Nicholas A., Garner, Harold R.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Identifying multi-hit carcinogenic gene combinations: Scaling up a weighted set cover algorithm using compressed binary matrix representation on a GPU de réir Al Hajri, Qais, Dash, Sajal, Feng, Wu-chun, Garner, Harold R., Anandakrishnan, Ramu

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations de réir Dash, Sajal, Kinney, Nicholas A., Varghese, Robin T., Garner, Harold R., Feng, Wu-chun, Anandakrishnan, Ramu

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Author Correction: Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations de réir Dash, Sajal, Kinney, Nicholas A., Varghese, Robin T., Garner, Harold R., Feng, Wu-chun, Anandakrishnan, Ramu

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán

Accelerating Electrostatic Surface Potential Calculation with Multiscale Approximation on Graphics Processing Units de réir Anandakrishnan, Ramu, Scogland, Tom R. W., Fenley, Andrew T., Gordon, John C., Feng, Wu-chun, Onufriev, Alexey V.

Faigh an téacs iomlán Faigh an téacs iomlán Faigh an téacs iomlán