Torthaí cuardaigh - Alexeyenko, Andrey

NEArender: an R package for functional interpretation of ‘omics’ data via network enrichment analysis de réir Jeggari, Ashwini, Alexeyenko, Andrey

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Individualized discovery of rare cancer drivers in global network context de réir Petrov, Iurii, Alexeyenko, Andrey

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Global networks of functional coupling in eukaryotes from comprehensive data integration de réir Alexeyenko, Andrey, Sonnhammer, Erik L.L.

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Distinguishing between driver and passenger mutations in individual cancer genomes by network enrichment analysis de réir Merid, Simon Kebede, Goranskaya, Daria, Alexeyenko, Andrey

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Calcyon mRNA expression in the frontal-striatal circuitry and its relationship to vesicular processes and ADHD de réir Heijtz, Rochellys Diaz, Alexeyenko, Andrey, Castellanos, F Xavier

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The regulation of hydroxysteroid 17β-dehydrogenase type 1 and 2 gene expression in breast cancer cell lines by estradiol, dihydrotestosterone, microRNAs, and genes related to breas... de réir Hilborn, Erik, Stål, Olle, Alexeyenko, Andrey, Jansson, Agneta

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Network Analysis of Functional Genomics Data: Application to Avian Sex-Biased Gene Expression de réir Frings, Oliver, Mank, Judith E., Alexeyenko, Andrey, Sonnhammer, Erik L. L.

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Statistical Assessment of Crosstalk Enrichment between Gene Groups in Biological Networks de réir McCormack, Theodore, Frings, Oliver, Alexeyenko, Andrey, Sonnhammer, Erik L. L.

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Protein profiling and network enrichment analysis in individuals before and after the onset of rheumatoid arthritis de réir Brink, Mikael, Lundquist, Anders, Alexeyenko, Andrey, Lejon, Kristina, Rantapää-Dahlqvist, Solbritt

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Prediction of response to anti-cancer drugs becomes robust via network integration of molecular data de réir Franco, Marcela, Jeggari, Ashwini, Peuget, Sylvain, Böttger, Franziska, Selivanova, Galina, Alexeyenko, Andrey

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EviNet: a web platform for network enrichment analysis with flexible definition of gene sets de réir Jeggari, Ashwini, Alekseenko, Zhanna, Petrov, Iurii, Dias, José M, Ericson, Johan, Alexeyenko, Andrey

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Comparative interactomics with Funcoup 2.0 de réir Alexeyenko, Andrey, Schmitt, Thomas, Tjärnberg, Andreas, Guala, Dmitri, Frings, Oliver, Sonnhammer, Erik L. L.

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Network enrichment analysis: extension of gene-set enrichment analysis to gene networks de réir Alexeyenko, Andrey, Lee, Woojoo, Pernemalm, Maria, Guegan, Justin, Dessen, Philippe, Lazar, Vladimir, Lehtiö, Janne, Pawitan, Yudi

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Identifying and Assessing Interesting Subgroups in a Heterogeneous Population de réir Lee, Woojoo, Alexeyenko, Andrey, Pernemalm, Maria, Guegan, Justine, Dessen, Philippe, Lazar, Vladimir, Lehtiö, Janne, Pawitan, Yudi

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Novel Genes and Pathways Modulated by Syndecan-1: Implications for the Proliferation and Cell-Cycle Regulation of Malignant Mesothelioma Cells de réir Szatmári, Tünde, Mundt, Filip, Heidari-Hamedani, Ghazal, Zong, Fang, Ferolla, Elena, Alexeyenko, Andrey, Hjerpe, Anders, Dobra, Katalin

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Inhibition of tumor cell proliferation and motility by fibroblasts is both contact and soluble factor dependent de réir Alkasalias, Twana, Flaberg, Emilie, Kashuba, Vladimir, Alexeyenko, Andrey, Pavlova, Tatiana, Savchenko, Andrii, Szekely, Laszlo, Klein, George, Guven, Hayrettin

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Dynamic Zebrafish Interactome Reveals Transcriptional Mechanisms of Dioxin Toxicity de réir Alexeyenko, Andrey, Wassenberg, Deena M., Lobenhofer, Edward K., Yen, Jerry, Linney, Elwood, Sonnhammer, Erik L. L., Meyer, Joel N.

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Protein Expression in Tonsillar and Base of Tongue Cancer and in Relation to Human Papillomavirus (HPV) and Clinical Outcome de réir Ramqvist, Torbjörn, Näsman, Anders, Franzén, Bo, Bersani, Cinzia, Alexeyenko, Andrey, Becker, Susanne, Haeggblom, Linnea, Kolev, Aeneas, Dalianis, Tina, Munck-Wikland, Eva

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Comprehensive analysis of the genome transcriptome and proteome landscapes of three tumor cell lines de réir Akan, Pelin, Alexeyenko, Andrey, Costea, Paul Igor, Hedberg, Lilia, Solnestam, Beata Werne, Lundin, Sverker, Hällman, Jimmie, Lundberg, Emma, Uhlén, Mathias, Lundeberg, Joakim

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Protein profiling of fine‐needle aspirates reveals subtype‐associated immune signatures and involvement of chemokines in breast cancer de réir Franzén, Bo, Alexeyenko, Andrey, Kamali‐Moghaddam, Masood, Hatschek, Thomas, Kanter, Lena, Ramqvist, Torbjörn, Kierkegaard, Jonas, Masucci, Giuseppe, Auer, Gert, Landegren, Ulf, Lewensohn, Rolf

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