Хайлтын үр дүнгүүд - Alexey I. Nesvizhskii

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  1. 1
    Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments

    Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments -н Alexey I. Nesvizhskii

    Хэвлэсэн 2012
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    Revisão
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  2. 2
    Recent advances in computational algorithms and software for large-scale glycoproteomics

    Recent advances in computational algorithms and software for large-scale glycoproteomics -н Daniel A. Polasky, Alexey I. Nesvizhskii

    Хэвлэсэн 2022
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    Revisão
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  3. 3
    BatMass: a Java Software Platform for LC–MS Data Visualization in Proteomics and Metabolomics

    BatMass: a Java Software Platform for LC–MS Data Visualization in Proteomics and Metabolomics -н Dmitry M. Avtonomov, Alexander Raskind, Alexey I. Nesvizhskii

    Хэвлэсэн 2016
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    Artigo
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  4. 4
    SAINT-MS1: Protein–Protein Interaction Scoring Using Label-free Intensity Data in Affinity Purification-Mass Spectrometry Experiments

    SAINT-MS1: Protein–Protein Interaction Scoring Using Label-free Intensity Data in Affinity Purification-Mass Spectrometry Experiments -н Hyungwon Choi, Timo Glatter, Mathias Gstaiger, Alexey I. Nesvizhskii

    Хэвлэсэн 2012
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    Artigo
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  5. 5
    Multiattribute Glycan Identification and FDR Control for Glycoproteomics

    Multiattribute Glycan Identification and FDR Control for Glycoproteomics -н Daniel A. Polasky, Daniel Geiszler, Fengchao Yu, Alexey I. Nesvizhskii

    Хэвлэсэн 2022
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    Artigo
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  6. 6
    Fast and comprehensive N- and O-glycoproteomics analysis with MSFragger-Glyco

    Fast and comprehensive N- and O-glycoproteomics analysis with MSFragger-Glyco -н Daniel A. Polasky, Fengchao Yu, Guo Ci Teo, Alexey I. Nesvizhskii

    Хэвлэсэн 2020
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    Artigo
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  7. 7
    Two-pass alignment improves novel splice junction quantification

    Two-pass alignment improves novel splice junction quantification -н Brendan Veeneman, Sudhanshu Shukla, Saravana M. Dhanasekaran, Arul M. Chinnaiyan, Alexey I. Nesvizhskii

    Хэвлэсэн 2015
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    Artigo
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  8. 8
    Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology

    Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology -н Kang Ning, Hoong Kee Ng, Sriganesh Srihari, Wai Yie Leong, Alexey I. Nesvizhskii

    Хэвлэсэн 2010
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    Artigo
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  9. 9
    LuciPHOr: Algorithm for Phosphorylation Site Localization with False Localization Rate Estimation Using Modified Target-Decoy Approach

    LuciPHOr: Algorithm for Phosphorylation Site Localization with False Localization Rate Estimation Using Modified Target-Decoy Approach -н Damian Fermin, Scott J. Walmsley, Anne‐Claude Gingras, Hyungwon Choi, Alexey I. Nesvizhskii

    Хэвлэсэн 2013
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    Artigo
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  10. 10
    SAINTexpress: Improvements and additional features in Significance Analysis of INTeractome software

    SAINTexpress: Improvements and additional features in Significance Analysis of INTeractome software -н Guoci Teo, Guomin Liu, Jianping Zhang, Alexey I. Nesvizhskii, Anne‐Claude Gingras, Hyungwon Choi

    Хэвлэсэн 2013
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    Artigo
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  11. 11
    The transcription elongation factor TFIIS is a component of RNA polymerase II preinitiation complexes

    The transcription elongation factor TFIIS is a component of RNA polymerase II preinitiation complexes -н Bong Keun Kim, Alexey I. Nesvizhskii, Priya Rani, Steven Hahn, Ruedi Aebersold, Jeffrey A. Ranish

    Хэвлэсэн 2007
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    Artigo
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  12. 12
    Genetic Networks Inducing Invasive Growth in <i>Saccharomyces cerevisiae</i> Identified Through Systematic Genome-Wide Overexpression

    Genetic Networks Inducing Invasive Growth in <i>Saccharomyces cerevisiae</i> Identified Through Systematic Genome-Wide Overexpression -н Christian A. Shively, Matthew J. Eckwahl, Craig J. Dobry, Dattatreya Mellacheruvu, Alexey I. Nesvizhskii, Anuj Kumar

    Хэвлэсэн 2013
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    Artigo
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  13. 13
    Label‐free quantitative proteomics and SAINT analysis enable interactome mapping for the human Ser/Thr protein phosphatase 5

    Label‐free quantitative proteomics and SAINT analysis enable interactome mapping for the human Ser/Thr protein phosphatase 5 -н Dana V. Skarra, Marilyn Goudreault, Hyungwon Choi, Michael Mullin, Alexey I. Nesvizhskii, Anne‐Claude Gingras, Richard E. Honkanen

    Хэвлэсэн 2011
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    Artigo
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  14. 14
    The functional interactome landscape of the human histone deacetylase family

    The functional interactome landscape of the human histone deacetylase family -н Preeti Joshi, Todd M. Greco, Amanda J. Guise, Yang Luo, Fang Yu, Alexey I. Nesvizhskii, Ileana M. Cristea

    Хэвлэсэн 2013
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    Artigo
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  15. 15
    ProHits-viz: a suite of web tools for visualizing interaction proteomics data

    ProHits-viz: a suite of web tools for visualizing interaction proteomics data -н James D.R. Knight, Hyungwon Choi, Gagan D. Gupta, Laurence Pelletier, Brian Raught, Alexey I. Nesvizhskii, Anne‐Claude Gingras

    Хэвлэсэн 2017
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    Carta
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  16. 16
    Deep learning to decode sites of RNA translation in normal and cancerous tissues

    Deep learning to decode sites of RNA translation in normal and cancerous tissues -н Jim Clauwaert, Zahra McVey, Ramneek Gupta, Ian Yannuzzi, Venkatesha Basrur, Alexey I. Nesvizhskii, Gerben Menschaert, John R. Prensner

    Хэвлэсэн 2025
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    Artigo
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  17. 17
    The Ewing Sarcoma Secretome and Its Response to Activation of Wnt/beta-catenin Signaling

    The Ewing Sarcoma Secretome and Its Response to Activation of Wnt/beta-catenin Signaling -н Allegra G. Hawkins, Venkatesha Basrur, Felipe da Veiga Leprevost, Elisabeth A. Pedersen, Colin Sperring, Alexey I. Nesvizhskii, Elizabeth R. Lawlor

    Хэвлэсэн 2018
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    Artigo
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  18. 18
    Autoinhibited kinesin-1 adopts a hierarchical folding pattern

    Autoinhibited kinesin-1 adopts a hierarchical folding pattern -н Zhenyu Tan, Yang Yue, Felipe da Veiga Leprevost, Sarah E. Haynes, Venkatesha Basrur, Alexey I. Nesvizhskii, Kristen J. Verhey, Michael A. Cianfrocco

    Хэвлэсэн 2023
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    Artigo
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  19. 19
    SAINT: probabilistic scoring of affinity purification–mass spectrometry data

    SAINT: probabilistic scoring of affinity purification–mass spectrometry data -н Hyungwon Choi, Brett Larsen, Zhen-Yuan Lin, Ashton Breitkreutz, Dattatreya Mellacheruvu, Damian Fermin, Zhaohui Qin, Mike Tyers, Anne‐Claude Gingras, Alexey I. Nesvizhskii

    Хэвлэсэн 2010
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    Artigo
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  20. 20
    Greazy: Open-Source Software for Automated Phospholipid Tandem Mass Spectrometry Identification

    Greazy: Open-Source Software for Automated Phospholipid Tandem Mass Spectrometry Identification -н Michael A. Kochen, Matthew Chambers, Jay D. Holman, Alexey I. Nesvizhskii, Susan T. Weintraub, John T. Belisle, M. Nurul Islam, Johannes Griss, David L. Tabb

    Хэвлэсэн 2016
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    Artigo
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