Resultados da pesquisa - Ahmed Mahfouz

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  1. 1
    Hierarchical progressive learning of cell identities in single-cell data

    Hierarchical progressive learning of cell identities in single-cell data Por Lieke Michielsen, Marcel J. T. Reinders, Ahmed Mahfouz

    Publicado em 2021
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  2. 2
    Consequences and opportunities arising due to sparser single-cell RNA-seq datasets

    Consequences and opportunities arising due to sparser single-cell RNA-seq datasets Por Gerard A. Bouland, Ahmed Mahfouz, Marcel J. T. Reinders

    Publicado em 2023
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  3. 3
    SpaGE: Spatial Gene Enhancement using scRNA-seq

    SpaGE: Spatial Gene Enhancement using scRNA-seq Por Tamim Abdelaal, Soufiane Mourragui, Ahmed Mahfouz, Marcel J. T. Reinders

    Publicado em 2020
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  4. 4
    A comprehensive mouse kidney atlas enables rare cell population characterization and robust marker discovery

    A comprehensive mouse kidney atlas enables rare cell population characterization and robust marker discovery Por Claudio Novella-Rausell, Magda Grudniewska, Dorien J.M. Peters, Ahmed Mahfouz

    Publicado em 2023
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  5. 5
    Contrast-induced nephropathy

    Contrast-induced nephropathy Por NazarM. A. Mohammed, Ahmed Mahfouz, Katafan Achkar, IhsanMahmoud Rafie, Rachel Hajar

    Publicado em 2013
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  6. 6
    Unraveling the Complexity of the Cancer Microenvironment With Multidimensional Genomic and Cytometric Technologies

    Unraveling the Complexity of the Cancer Microenvironment With Multidimensional Genomic and Cytometric Technologies Por N. de Vries, Ahmed Mahfouz, Frits Koning, Noel F.C.C. de Miranda

    Publicado em 2020
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  7. 7
    Predicting Cell Populations in Single Cell Mass Cytometry Data

    Predicting Cell Populations in Single Cell Mass Cytometry Data Por Tamim Abdelaal, Vincent van Unen, Thomas Höllt, Frits Koning, Marcel J. T. Reinders, Ahmed Mahfouz

    Publicado em 2019
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  8. 8
    Shared Pathways Among Autism Candidate Genes Determined by Co-expression Network Analysis of the Developing Human Brain Transcriptome

    Shared Pathways Among Autism Candidate Genes Determined by Co-expression Network Analysis of the Developing Human Brain Transcriptome Por Ahmed Mahfouz, Mark N. Ziats, Owen M. Rennert, Boudewijn P. F. Lelieveldt, Marcel J. T. Reinders

    Publicado em 2015
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  9. 9
    A comparison of automatic cell identification methods for single-cell RNA sequencing data

    A comparison of automatic cell identification methods for single-cell RNA sequencing data Por Tamim Abdelaal, Lieke Michielsen, Davy Cats, Dylan Hoogduin, Hailiang Mei, Marcel J. T. Reinders, Ahmed Mahfouz

    Publicado em 2019
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  10. 10
    Cell type specificity of glucocorticoid signaling in the adult mouse hippocampus

    Cell type specificity of glucocorticoid signaling in the adult mouse hippocampus Por Eva M. G. Viho, Jacobus C. Buurstede, Jari B. Berkhout, Ahmed Mahfouz, Onno C. Meijer

    Publicado em 2021
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  11. 11
    An integrated single‐cell <scp>RNA</scp>‐seq atlas of the mouse hypothalamic paraventricular nucleus links transcriptomic and functional types

    An integrated single‐cell <scp>RNA</scp>‐seq atlas of the mouse hypothalamic paraventricular nucleus links transcriptomic and functional types Por Jari B. Berkhout, Delaram Poormoghadam, Chun‐Xia Yi, Andries Kalsbeek, Onno C. Meijer, Ahmed Mahfouz

    Publicado em 2024
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  12. 12
    Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex

    Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex Por Sepideh Babaei, Ahmed Mahfouz, Marc Hulsman, Boudewijn P. F. Lelieveldt, Jeroen de Ridder, Marcel J. T. Reinders

    Publicado em 2015
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  13. 13
    Single-cell reference mapping to construct and extend cell-type hierarchies

    Single-cell reference mapping to construct and extend cell-type hierarchies Por Lieke Michielsen, Mohammad Lotfollahi, Daniel Strobl, Lisa Sikkema, Marcel J. T. Reinders, Fabian J. Theis, Ahmed Mahfouz

    Publicado em 2023
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  14. 14
    Spatial transcriptomics reveal markers of histopathological changes in Duchenne muscular dystrophy mouse models

    Spatial transcriptomics reveal markers of histopathological changes in Duchenne muscular dystrophy mouse models Por Laura G.M. Heezen, Tamim Abdelaal, Maaike van Putten, Annemieke Aartsma‐Rus, Ahmed Mahfouz, Pietro Spitali

    Publicado em 2023
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  15. 15
    SIRV: spatial inference of RNA velocity at the single-cell resolution

    SIRV: spatial inference of RNA velocity at the single-cell resolution Por Tamim Abdelaal, Laurens Grossouw, R. Jeroen Pasterkamp, Boudewijn P. F. Lelieveldt, Marcel J. T. Reinders, Ahmed Mahfouz

    Publicado em 2024
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  16. 16
    Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings

    Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings Por Ahmed Mahfouz, Martijn van de Giessen, Laurens van der Maaten, Sjoerd M. H. Huisman, Marcel J. T. Reinders, Michael Hawrylycz, Boudewijn P. F. Lelieveldt

    Publicado em 2014
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  17. 17
    Single-cell RNA sequencing in facioscapulohumeral muscular dystrophy disease etiology and development

    Single-cell RNA sequencing in facioscapulohumeral muscular dystrophy disease etiology and development Por Anita van den Heuvel, Ahmed Mahfouz, Susan L. Kloet, Judit Balog, Baziel G.M. van Engelen, Rabi Tawil, Stephen J. Tapscott, Silvère M. van der Maarel

    Publicado em 2018
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  18. 18
    Corticosteroid Action in the Brain: The Potential of Selective Receptor Modulation

    Corticosteroid Action in the Brain: The Potential of Selective Receptor Modulation Por Eva M. G. Viho, Jacobus C. Buurstede, Ahmed Mahfouz, Lisa L. Koorneef, Lisa T. C. M. van Weert, René Houtman, Hazel Hunt, Jan Kroon, Onno C. Meijer

    Publicado em 2019
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  19. 19
    Integration of mass cytometry and mass spectrometry imaging for spatially resolved single-cell metabolic profiling

    Integration of mass cytometry and mass spectrometry imaging for spatially resolved single-cell metabolic profiling Por Joana B. Nunes, Marieke E. Ijsselsteijn, Tamim Abdelaal, Rick Ursem, Manon van der Ploeg, Martin Giera, Bart Everts, Ahmed Mahfouz, Bram Heijs, Noel F.C.C. de Miranda

    Publicado em 2024
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  20. 20
    Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells

    Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells Por Ishaan Gupta, Paul Collier, Bettina Haase, Ahmed Mahfouz, Anoushka Joglekar, Taylor Floyd, Frank Koopmans, Ben A. Barres, August B. Smit, Steven A. Sloan, Wenjie Luo, Olivier Fédrigo, M. Elizabeth Ross, Hagen Tilgner

    Publicado em 2018
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