खोज परिणाम - Özgün Babur

परिणाम को परिष्कृत करें
  1. 1
    ChiBE: interactive visualization and manipulation of BioPAX pathway models

    ChiBE: interactive visualization and manipulation of BioPAX pathway models द्वारा Özgün Babur, Uḡur Doḡrusöz, Emek Demir, Chris Sander

    प्रकाशित 2009
    पूर्ण पाठ प्राप्त करें पूर्ण पाठ प्राप्त करें
    Artigo
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  2. 2
    PathwayMapper: a collaborative visual web editor for cancer pathways and genomic data

    PathwayMapper: a collaborative visual web editor for cancer pathways and genomic data द्वारा Istemi Bahceci, Uḡur Doḡrusöz, Konnor La, Özgün Babur, Jianjiong Gao, Nikolaus Schultz

    प्रकाशित 2017
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    Artigo
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  3. 3
    P<scp>atika</scp>: an integrated visual environment for collaborative construction and analysis of cellular pathways

    P<scp>atika</scp>: an integrated visual environment for collaborative construction and analysis of cellular pathways द्वारा Esra Demir, Özgün Babur, Uḡur Doḡrusöz, Attila Gürsoy, G. Nisanci, Rengül Çetin-Atalay, Mehmet Öztürk

    प्रकाशित 2002
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    Artigo
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  4. 4
    Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations

    Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations द्वारा Özgün Babur, Mithat Gönen, Bülent Arman Aksoy, Nikolaus Schultz, Giovanni Ciriello, Chris Sander, Emek Demir

    प्रकाशित 2015
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    Artigo
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  5. 5
    Pathway Commons, a web resource for biological pathway data

    Pathway Commons, a web resource for biological pathway data द्वारा Ethan Cerami, Benjamin Groß, Emek Demir, Igor Rodchenkov, Özgün Babur, Nadia Anwar, Nikolaus Schultz, Gary D. Bader, Chris Sander

    प्रकाशित 2010
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    Artigo
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  6. 6
    Using Biological Pathway Data with Paxtools

    Using Biological Pathway Data with Paxtools द्वारा Emek Demir, Özgün Babur, Igor Rodchenkov, Bülent Arman Aksoy, Ken Fukuda, Benjamin Groß, Onur Sumer, Gary D. Bader, Chris Sander

    प्रकाशित 2013
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    Artigo
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  7. 7
    Large-scale automated machine reading discovers new cancer-driving mechanisms

    Large-scale automated machine reading discovers new cancer-driving mechanisms द्वारा Marco A. Valenzuela-Escárcega, Özgün Babur, Gus Hahn-Powell, Dane Bell, Thomas Hicks, Enrique Noriega-Atala, Xia Wang, Mihai Surdeanu, Emek Demir, Clayton T. Morrison

    प्रकाशित 2018
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    Artigo
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  8. 8
    Newt: a comprehensive web-based tool for viewing, constructing and analyzing biological maps

    Newt: a comprehensive web-based tool for viewing, constructing and analyzing biological maps द्वारा Hasan Balcı, Metin Can Siper, Nasim Saleh, Ilkin Safarli, Ludovic Roy, Merve Kilicarslan, Rumeysa Ozaydin, Alexander Mazein, Charles Auffray, Özgün Babur, Emek Demir, Uḡur Doḡrusöz

    प्रकाशित 2020
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    Artigo
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  9. 9
    Perturbation biology nominates upstream–downstream drug combinations in RAF inhibitor resistant melanoma cells

    Perturbation biology nominates upstream–downstream drug combinations in RAF inhibitor resistant melanoma cells द्वारा Anil Korkut, Weiqing Wang, Emek Demir, Bülent Arman Aksoy, Xiaohong Jing, Evan Molinelli, Özgün Babur, Debra L. Bemis, S. Onur Sumer, David B. Solit, Christine A. Pratilas, Chris Sander

    प्रकाशित 2015
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    Artigo
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  10. 10
    Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas

    Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas द्वारा Lawrence A. Donehower, Thierry Soussi, Anil Korkut, Yuexin Liu, André Schultz, Maria Cardenas, Xubin Li, Özgün Babur, Teng‐Kuei Hsu, Olivier Lichtarge, John N. Weinstein, Rehan Akbani, David A. Wheeler

    प्रकाशित 2019
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    Artigo
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  11. 11
    Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas

    Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas द्वारा Lawrence A. Donehower, Thierry Soussi, Anil Korkut, Yuexin Liu, André Schultz, Maria Cardenas, Xubin Li, Özgün Babur, Teng-Kuei Hsu, Olivier Lichtarge, John N. Weinstein, Rehan Akbani, David A. Wheeler

    प्रकाशित 2019
    पूर्ण पाठ प्राप्त करें पूर्ण पाठ प्राप्त करें
    Errata/Corrigenda
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  12. 12
    Causal interactions from proteomic profiles: Molecular data meet pathway knowledge

    Causal interactions from proteomic profiles: Molecular data meet pathway knowledge द्वारा Özgün Babur, Augustin Luna, Anil Korkut, Funda Durupınar, Metin Can Siper, Uḡur Doḡrusöz, Alvaro Sebastian Vaca Jacome, Ryan Peckner, Karen E. Christianson, Jacob D. Jaffe, Paul T. Spellman, Joseph E. Aslan, Chris Sander, Emek Demir

    प्रकाशित 2021
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    Artigo
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  13. 13
    Phosphoproteomic quantitation and causal analysis reveal pathways in GPVI/ITAM-mediated platelet activation programs

    Phosphoproteomic quantitation and causal analysis reveal pathways in GPVI/ITAM-mediated platelet activation programs द्वारा Özgün Babur, Alexander R. Melrose, Jennifer M. Cunliffe, John Klimek, Jiaqing Pang, Anna-Liisa I. Sepp, Jevgenia Zilberman‐Rudenko, Samuel Tassi Yunga, Tony J. Zheng, Iván Parra‐Izquierdo, Jessica Minnier, Owen J. T. McCarty, Emek Demir, Ashok P. Reddy, Phillip A. Wilmarth, Larry L. David, Joseph E. Aslan

    प्रकाशित 2020
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    Artigo
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  14. 14
    Pathway Commons 2019 Update: integration, analysis and exploration of pathway data

    Pathway Commons 2019 Update: integration, analysis and exploration of pathway data द्वारा Igor Rodchenkov, Özgün Babur, Augustin Luna, Bülent Arman Aksoy, Jeffrey V. Wong, Dylan Fong, Max Franz, Metin Can Siper, Manfred Cheung, Michael Wrana, Harsh Mistry, Logan Mosier, Jonah Dlin, Qizhi Wen, Caitlin O’Callaghan, Wanxin Li, G Domingues Elder, Peter T. Smith, Christian Dallago, Ethan Cerami, Benjamin Groß, Uḡur Doḡrusöz, Emek Demir, Gary D. Bader, Chris Sander

    प्रकाशित 2019
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    Artigo
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  15. 15
    The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance

    The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance द्वारा Sunil K. Joshi, Tamilla Nechiporuk, Daniel Bottomly, Paul Piehowski, Julie A. Reisz, Janét Pittsenbarger, Andy Kaempf, Sara J.C. Gosline, Yi-Ting Wang, Joshua Hansen, Marina Gritsenko, Chelsea Hutchinson, Karl Weitz, Jamie Moon, Francesca Cendali, Thomas Fillmore, Chia‐Feng Tsai, Athena Schepmoes, Tujin Shi, Osama A. Arshad, Jason McDermott, Özgün Babur, Kevin Watanabe‐Smith, Emek Demir, Angelo D’Alessandro, Tao Liu, Cristina E. Tognon, Jeffrey W. Tyner, Shannon K. McWeeney, Karin Rodland, Brian J. Druker, Elie Traer

    प्रकाशित 2021
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    Artigo
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  16. 16
    Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma

    Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma द्वारा A. Gordon Robertson, Juliann Shih, Christina Yau, Ewan A. Gibb, Junna Oba, Karen Mungall, Julian M. Hess, Vladislav Uzunangelov, Vonn Walter, Ludmila Danilova, Tara M. Lichtenberg, Melanie H. Kucherlapati, Patrick K. Kimes, Ming Tang, Alexander Penson, Özgün Babur, Rehan Akbani, Christopher A. Bristow, Katherine A. Hoadley, Lisa Iype, Matthew T. Chang, Andrew D. Cherniack, Christopher C. Benz, Gordon B. Mills, Roel G.W. Verhaak, Klaus Griewank, Ina Felau, Jean C. Zenklusen, Hui Shen, Lynn Schoenfield, Alexander J. Lazar, Mohamed H. Abdel‐Rahman, Sergio Román-Román, Marc‐Henri Stern, Colleen M. Cebulla, Michelle D. Williams, Martine J. Jager, Sarah E. Coupland, Bita Esmaeli, Cyriac Kandoth, Scott E. Woodman

    प्रकाशित 2018
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    Errata/Corrigenda
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  17. 17
    Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation

    Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation द्वारा Yifat Geffen, Shankara Anand, Yo Akiyama, Tomer M. Yaron, Yizhe Song, Jared L. Johnson, Akshay Govindan, Özgün Babur, Yize Li, Emily M. Huntsman, Liang-Bo Wang, Chet Birger, David I. Heiman, Qing Zhang, Mendy Miller, Yosef E. Maruvka, Nicholas J. Haradhvala, Anna Calinawan, Saveliy Belkin, Alexander Kerelsky, Karl R. Clauser, Karsten Krug, Shankha Satpathy, Samuel Payne, D.R. Mani, Michael A. Gillette, Saravana M. Dhanasekaran, Mathangi Thiagarajan, Mehdi Mesri, Henry Rodriguez, Ana I. Robles, Steven A. Carr, Alexander J. Lazar, François Aguet, Lewis C. Cantley, Li Ding, Gad Getz, Eunkyung An, Meenakshi Anurag, Jasmin Bavarva, Michael J. Birrer, Özgün Babur, Song Cao, Michele Ceccarelli, Daniel W. Chan, Arul M. Chinnaiyan, Hanbyul Cho, Shrabanti Chowdhury, Marcin Cieślik, Antonio Colaprico, Steven A. Carr, Felipe da Veiga Leprevost, Corbin Day, Marcin J. Domagalski, Yongchao Dou, Brian J. Druker, Nathan Edwards, Matthew J. Ellis, David Fenyö, Steven M. Foltz, Alicia Francis, Tania J González-Robles, Sara J.C. Gosline, Zeynep H. Gümüş, Tara Hiltke, Runyu Hong, Galen Hostetter, Yingwei Hu, Chen Huang, Antonio Iavarone, Eric J. Jaehnig, Scott Jewel, Jiayi Ji, Wen Jiang, Lizabeth Katsnelson, Karen A. Ketchum, Iga Kołodziejczak, Chandan Kumar‐Sinha, Karsten Krug, Jonathan T. Lei, Wen-Wei Liang, Yuxing Liao, Caleb M. Lindgren, Tao Liu, Wenke Liu, Weiping Ma, Wilson McKerrow, Mehdi Mesri, D.R. Mani, Alexey I. Nesvizhskii, Chelsea J. Newton, Robert Oldroyd, Gilbert S. Omenn, Amanda G. Paulovich, Francesca Petralia, Pietro Pugliese, Boris Reva, Karin Rodland, Kelly V. Ruggles, Dmitry Rykunov

    प्रकाशित 2023
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    Artigo
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  18. 18
    Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma

    Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma द्वारा A. Gordon Robertson, Juliann Shih, Christina Yau, Ewan A. Gibb, Junna Oba, Karen Mungall, Julian M. Hess, Vladislav Uzunangelov, Vonn Walter, Ludmila Danilova, Tara M. Lichtenberg, Melanie H. Kucherlapati, Patrick K. Kimes, Ming Tang, Alexander Penson, Özgün Babur, Rehan Akbani, Christopher A. Bristow, Katherine A. Hoadley, Lisa Iype, Matthew T. Chang, Andrew D. Cherniack, Christopher C. Benz, Gordon B. Mills, Roel G.W. Verhaak, Klaus Griewank, Ina Felau, Jean C. Zenklusen, Hui Shen, Lynn Schoenfield, Alexander J. Lazar, Mohamed H. Abdel‐Rahman, Sergio Román-Román, Marc‐Henri Stern, Colleen M. Cebulla, Michelle D. Williams, Martine J. Jager, Sarah E. Coupland, Bita Esmaeli, Cyriac Kandoth, Scott E. Woodman, Mohamed H. Abdel‐Rahman, Rehan Akbani, Adrian Ally, J. Todd Auman, Özgün Babur, Miruna Balasundaram, Saianand Balu, Christopher C. Benz, Rameen Beroukhim, İnanç Birol, Tom Bodenheimer, Jay Bowen, Reanne Bowlby, Christopher A. Bristow, Denise Brooks, Rebecca Carlsen, Colleen M. Cebulla, Matthew T. Chang, Andrew D. Cherniack, Lynda Chin, Juok Cho, Eric Chuah, Sudha Chudamani, Carrie Cibulskis, Kristian Cibulskis, Leslie Cope, Sarah E. Coupland, Ludmila Danilova, Timothy Defreitas, John A. Demchok, Laurence Desjardins, Noreen Dhalla, Bita Esmaeli, Ina Felau, Martin L. Ferguson, Scott Frazer, Stacey Gabriel, Julie M. Gastier‐Foster, Nils Gehlenborg, Mark Gerken, Hui Shen, Gad Getz, Ewan A. Gibb, Klaus Griewank, Elizabeth A. Grimm, D. Neil Hayes, Apurva M. Hegde, David I. Heiman, Carmen Helsel, Julian M. Hess, Katherine A. Hoadley, Shital Hobensack, Robert A. Holt, Alan P. Hoyle, Xin Hu, Carolyn M. Hutter, Martine J. Jager, Joshua M. Stuart, Corbin D. Jones

    प्रकाशित 2017
    पूर्ण पाठ प्राप्त करें
    Artigo
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    में बचाया:
  19. 19
    PPM1D mutations are oncogenic drivers of de novo diffuse midline glioma formation

    PPM1D mutations are oncogenic drivers of de novo diffuse midline glioma formation द्वारा Prasidda Khadka, Zachary J. Reitman, Sophie D. Lu, Graham Buchan, Gabrielle Gionet, Frank Dubois, Diana Carvalho, Juliann Shih, Shu Zhang, Noah F. Greenwald, Travis Zack, Ofer Shapira, Kristine Pelton, Rachel Hartley, Heather Bear, Yohanna Georgis, Spandana Jarmale, Randy Melanson, Kevin Bonanno, Kathleen Schoolcraft, Peter G. Miller, Alexandra L. Condurat, Elizabeth M. Gonzalez, Kenin Qian, Eric Morin, Jaldeep Langhnoja, Leslie Lupien, Verónica Rendo, Jeromy J. Digiacomo, Dayle K. Wang, Kevin N. Zhou, Rushil Kumbhani, María E. Guerra García, Claire Sinai, Sarah Becker, Rachel Schneider, Jayne Vogelzang, Karsten Krug, Amy Goodale, Tanaz Abid, Zohra Kalani, Federica Piccioni, Rameen Beroukhim, Nicole S. Persky, David E. Root, Ángel M. Carcaboso, Benjamin L. Ebert, Christine Fuller, Özgün Babur, Mark W. Kieran, Chris Jones, Hasmik Keshishian, Keith L. Ligon, Steven A. Carr, Timothy N. Phoenix, Pratiti Bandopadhayay

    प्रकाशित 2022
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    Artigo
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  20. 20
    The BioPAX community standard for pathway data sharing

    The BioPAX community standard for pathway data sharing द्वारा Emek Demir, Michael P. Cary, Suzanne Paley, Ken Fukuda, Christian Lemer, Imre Västrik, Guanming Wu, Peter D’Eustachio, Carl F. Schaefer, Joanne Luciano, Frank Schacherer, Irma Martínez‐Flores, Zhenjun Hu, Verónica Jiménez‐Jacinto, Joshi-Tope Geeta, Kumaran Kandasamy, Alejandra López-Fuentes, Huaiyu Mi, Elgar Pichler, Igor Rodchenkov, Andrea Splendiani, Sasha Tkachev, Jeremy Zucker, Gopal Gopinath, Harsha Rajasimha, Ranjani Ramakrishnan, Imran Shah, Mustafa Syed, Nadia Anwar, Özgün Babur, Michael L. Blinov, Erik Brauner, Dan Corwin, Sylva L. Donaldson, Frank Gibbons, Robert N. Goldberg, Peter Hornbeck, Augustin Luna, Peter Murray‐Rust, Eric Neumann, Oliver Ruebenacker, Matthias Samwald, Martijn van Iersel, Sarala Wimalaratne, K.W. Allen, Burk Braun, Michelle Whirl‐Carrillo, Kei-Hoi Cheung, Kam D. Dahlquist, Andrew Finney, Marc Gillespie, Elizabeth M. Glass, Li Gong, Robin Haw, Michael Honig, Olivier Hubaut, David W. Kane, Shiva Krupa, Martina Kutmon, Julie Mosty Leonard, Debbie Marks, David Merberg, Victoria Petri, Alexander R. Pico, Dean Ravenscroft, Liya Ren, Nigam H. Shah, Margot Sunshine, Rebecca Tang, Ryan Whaley, Stan Letovksy, Kenneth H. Buetow, Andrey Rzhetsky, Vincent Schächter, Bruno Sobral, Uḡur Doḡrusöz, Shannon K. McWeeney, Mirit I. Aladjem, Ewan Birney, Julio Collado‐Vides, Susumu Goto, Michael Hucka, Nicolas Le Novère, Natalia Maltsev, Akhilesh Pandey, Paul D. Thomas, Edgar Wingender, Peter D. Karp, Chris Sander, Gary D. Bader

    प्रकाशित 2010
    पूर्ण पाठ प्राप्त करें
    Artigo
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