Torthaí cuardaigh - Gabriel A. Al‐Ghalith

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  1. 1
    BURST enables mathematically optimal short-read alignment for big data

    BURST enables mathematically optimal short-read alignment for big data de réir Gabriel A. Al‐Ghalith, Dan Knights

    Foilsithe / Cruthaithe 2020
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  2. 2
    NINJA-OPS: Fast Accurate Marker Gene Alignment Using Concatenated Ribosomes

    NINJA-OPS: Fast Accurate Marker Gene Alignment Using Concatenated Ribosomes de réir Gabriel A. Al‐Ghalith, Emmanuel Montassier, Henry N. Ward, Dan Knights

    Foilsithe / Cruthaithe 2016
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  3. 3
    SHI7 Is a Self-Learning Pipeline for Multipurpose Short-Read DNA Quality Control

    SHI7 Is a Self-Learning Pipeline for Multipurpose Short-Read DNA Quality Control de réir Gabriel A. Al‐Ghalith, Benjamin Hillmann, K. Kian Ang, Robin Shields‐Cutler, Dan Knights

    Foilsithe / Cruthaithe 2018
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  4. 4
    SHOGUN: a modular, accurate and scalable framework for microbiome quantification

    SHOGUN: a modular, accurate and scalable framework for microbiome quantification de réir Benjamin Hillmann, Gabriel A. Al‐Ghalith, Robin Shields‐Cutler, Qiyun Zhu, Rob Knight, Dan Knights

    Foilsithe / Cruthaithe 2020
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  5. 5
    Development of the Human Mycobiome over the First Month of Life and across Body Sites

    Development of the Human Mycobiome over the First Month of Life and across Body Sites de réir Tonya Ward, Maria Gloria Dominguez‐Bello, Tim Heisel, Gabriel A. Al‐Ghalith, Dan Knights, Cheryl A. Gale

    Foilsithe / Cruthaithe 2018
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  6. 6
    Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreaux's sifakas (<i>Propithecus verreauxi</i>)

    Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreaux's sifakas (<i>Propithecus verreauxi</i>) de réir Andrea Springer, Claudia Fichtel, Gabriel A. Al‐Ghalith, Flávia Koch, Katherine R. Amato, Jonathan B. Clayton, Dan Knights, Peter M. Kappeler

    Foilsithe / Cruthaithe 2017
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  7. 7
    High-Fat Diet Changes Fungal Microbiomes and Interkingdom Relationships in the Murine Gut

    High-Fat Diet Changes Fungal Microbiomes and Interkingdom Relationships in the Murine Gut de réir Timothy Heisel, Emmanuel Montassier, Abigail Johnson, Gabriel A. Al‐Ghalith, Yi-Wei Lin, Li-Na Wei, Dan Knights, Cheryl A. Gale

    Foilsithe / Cruthaithe 2017
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  8. 8
    Systematic review: human gut dysbiosis induced by non-antibiotic prescription medications

    Systematic review: human gut dysbiosis induced by non-antibiotic prescription medications de réir Quentin Le Bastard, Gabriel A. Al‐Ghalith, Matthieu Grégoire, Guillaume Chapelet, François Javaudin, Éric Dailly, Éric Batard, Dan Knights, Emmanuel Montassier

    Foilsithe / Cruthaithe 2017
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  9. 9
    Evaluating the Information Content of Shallow Shotgun Metagenomics

    Evaluating the Information Content of Shallow Shotgun Metagenomics de réir Benjamin Hillmann, Gabriel A. Al‐Ghalith, Robin Shields‐Cutler, Qiyun Zhu, Daryl M. Gohl, Kenneth B. Beckman, Rob Knight, Dan Knights

    Foilsithe / Cruthaithe 2018
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  10. 10
    Pretreatment gut microbiome predicts chemotherapy-related bloodstream infection

    Pretreatment gut microbiome predicts chemotherapy-related bloodstream infection de réir Emmanuel Montassier, Gabriel A. Al‐Ghalith, Tonya Ward, Stéphane Corvec, Thomas Gastinne, G. Potel, Philippe Moreau, Marie France De La Cochetiere, Éric Batard, Dan Knights

    Foilsithe / Cruthaithe 2016
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  11. 11
    Chemotherapy‐driven dysbiosis in the intestinal microbiome

    Chemotherapy‐driven dysbiosis in the intestinal microbiome de réir Emmanuel Montassier, Thomas Gastinne, Pajau Vangay, Gabriel A. Al‐Ghalith, Stanislas Bruley des Varannes, Sébastien Massart, Philippe Moreau, G. Potel, Marie France De La Cochetiere, Éric Batard, Dan Knights

    Foilsithe / Cruthaithe 2015
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  12. 12
    An Increased Abundance of Clostridiaceae Characterizes Arthritis in Inflammatory Bowel Disease and Rheumatoid Arthritis: A Cross-sectional Study

    An Increased Abundance of Clostridiaceae Characterizes Arthritis in Inflammatory Bowel Disease and Rheumatoid Arthritis: A Cross-sectional Study de réir David A. Muñiz Pedrogo, Jun Chen, Benjamin Hillmann, Patricio Jeraldo, Gabriel A. Al‐Ghalith, Veena Taneja, John M. Davis, Dan Knights, Heidi Nelson, William A. Faubion, Laura E. Raffals, Purna Kashyap

    Foilsithe / Cruthaithe 2018
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  13. 13
    Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans

    Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans de réir Abigail Johnson, Pajau Vangay, Gabriel A. Al‐Ghalith, Benjamin Hillmann, Tonya Ward, Robin Shields‐Cutler, Austin D. Kim, Anna Shmagel, Arzang N. Syed, Jens Walter, Ravi S. Menon, Katie Koecher, Dan Knights

    Foilsithe / Cruthaithe 2019
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  14. 14
    Distribution of Bacterial α1,3-Galactosyltransferase Genes in the Human Gut Microbiome

    Distribution of Bacterial α1,3-Galactosyltransferase Genes in the Human Gut Microbiome de réir Emmanuel Montassier, Gabriel A. Al‐Ghalith, Camille Mathé, Quentin Le Bastard, Venceslas Douillard, Abel Garnier, Rémi Guimon, Bastien Raimondeau, Yann Touchefeu, Émilie Duchalais, Nicolas Vince, Sophie Limou, Pierre‐Antoine Gourraud, David Laplaud, Arnaud Nicot, Jean‐Paul Soulillou, Laureline Berthelot

    Foilsithe / Cruthaithe 2020
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  15. 15
    Captivity humanizes the primate microbiome

    Captivity humanizes the primate microbiome de réir Jonathan B. Clayton, Pajau Vangay, Hu Huang, Tonya Ward, Benjamin Hillmann, Gabriel A. Al‐Ghalith, Dominic A. Travis, Ha Thang Long, Bui Van Tuan, Vo Van Minh, Francis Cabana, Tilo Nadler, Barbara Toddes, Tami Murphy, Kenneth E. Glander, Timothy J. Johnson, Dan Knights

    Foilsithe / Cruthaithe 2016
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  16. 16
    Complex host genetics influence the microbiome in inflammatory bowel disease

    Complex host genetics influence the microbiome in inflammatory bowel disease de réir Dan Knights, Mark S. Silverberg, Rinse K. Weersma, Dirk Gevers, Gerard Dijkstra, Hailiang Huang, Andrea D. Tyler, Suzanne van Sommeren, Floris Imhann, Joanne M. Stempak, Hu Huang, Pajau Vangay, Gabriel A. Al‐Ghalith, Caitlin Russell, Jenny Sauk, Jo Knight, Mark J. Daly, Curtis Huttenhower, Ramnik J. Xavier

    Foilsithe / Cruthaithe 2014
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  17. 17
    US Immigration Westernizes the Human Gut Microbiome

    US Immigration Westernizes the Human Gut Microbiome de réir Pajau Vangay, Abigail Johnson, Tonya Ward, Gabriel A. Al‐Ghalith, Robin Shields‐Cutler, Benjamin Hillmann, Sarah K. Lucas, Lalit K. Beura, Emily A. Thompson, Lisa Till, Rodolfo Batres, Bwei Paw, Shannon Pergament, Pimpanitta Saenyakul, Mary Xiong, Austin D. Kim, Grant Kim, David Masopust, Eric C. Martens, Chaisiri Angkurawaranon, Rose McGready, Purna Kashyap, Kathleen A. Culhane‐Pera, Dan Knights

    Foilsithe / Cruthaithe 2018
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  18. 18
    Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model

    Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model de réir Jonathan B. Clayton, Gabriel A. Al‐Ghalith, Ha Thang Long, Bui Van Tuan, Francis Cabana, Hu Huang, Pajau Vangay, Tonya Ward, Vo Van Minh, Nguyen Ai Tam, Nguyen Tat Dat, Dominic A. Travis, Michael P. Murtaugh, Herbert H. Covert, Kenneth E. Glander, Tilo Nadler, Barbara Toddes, John Chih Mun Sha, Randy Singer, Dan Knights, Timothy J. Johnson

    Foilsithe / Cruthaithe 2018
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  19. 19
    Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea

    Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea de réir Qiyun Zhu, Uyen Mai, Wayne Pfeiffer, Stefan Janssen, Francesco Asnicar, Jon G. Sanders, Pedro Belda‐Ferre, Gabriel A. Al‐Ghalith, Evguenia Kopylova, Daniel McDonald, Tomasz Kościółek, John Yin, Shi Huang, Nimaichand Salam, Jian-Yu Jiao, Zijun Wu, Zhenjiang Zech Xu, Kalen Cantrell, Yimeng Yang, Erfan Sayyari, Maryam Rabiee, James T. Morton, Sheila Podell, Dan Knights, Wen‐Jun Li, Curtis Huttenhower, Nicola Segata, Larry Smarr, Siavash Mirarab, Rob Knight

    Foilsithe / Cruthaithe 2019
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  20. 20
    Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity

    Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity de réir Xue‐Song Zhang, Jackie Li, Kimberly A. Krautkramer, Michelle Badri, Thomas Battaglia, Timothy C. Borbet, Hyunwook Koh, Sandy Ng, Rachel A. Sibley, Yuanyuan Li, Wimal Pathmasiri, Shawn Jindal, Robin Shields‐Cutler, Ben Hillmann, Gabriel A. Al‐Ghalith, Victoria Ruiz, Alexandra E. Livanos, Angélique B. van ‘t Wout, Nabeetha Nagalingam, Arlin B. Rogers, Susan Sumner, Dan Knights, John M. Denu, Huilin Li, Kelly V. Ruggles, Richard Bonneau, R. Anthony Williamson, Marcus Rauch, Martin J. Blaser

    Foilsithe / Cruthaithe 2018
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